KEGG   Desmodus rotundus (common vampire bat): 112314952
Entry
112314952         CDS       T05907                                 
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56 isoform X1
  KO
K12026  tripartite motif-containing protein 56 [EC:2.3.2.27]
Organism
dro  Desmodus rotundus (common vampire bat)
Brite
KEGG Orthology (KO) [BR:dro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dro04121]
    112314952 (TRIM56)
Enzymes [BR:dro01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112314952 (TRIM56)
Ubiquitin system [BR:dro04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    112314952 (TRIM56)
SSDB
Motif
Pfam: zf-RING_UBOX zf-B_box zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 zf-C3HC4_4 zf-RING_5
Other DBs
NCBI-GeneID: 112314952
NCBI-ProteinID: XP_024427350
Position
Unknown
AA seq 786 aa
MQAAPTFSHLLNVCKEKGGSFAQEQVAGGPTRPEENFWPFSMVSQGSSPSLLEALSSDFL
ACKICLEQLRAPKTLPCLHTYCQDCLAQLADGGHLRCPECRENVPVPPAGVAAFKTNFFV
NGLLDLVKARAGGDLRAGKPACALCPLMGGASAGGPATARCLDCADDLCQACADGHRCTR
QTHTHRVVDLVGYRAGLYDEEARERQAAQCPQHPGEALRFLCQPCSQLLCRECRLDPHLD
HPCLPLAEAVRARRPGLEELLAGVDKSLAELEAARMVEKEALACLREQVARVGTQVEEAA
EGVLRALLAQKKEVLGQLRAHMEAAEEAARERLGELESREQVARAAAAFARRVLSLGREA
EILSLEGAIAQRLQQLQGFPWMPGPSPCLLPQLELHPGLRDKNCHLLWLSFEKQQPQKDS
GKDGAGRQEGEETQNRREDGARAPKEDRTPTPQKDGSQTPNVERAQTPKEGRSQMPQEDG
GVQTGGRSNKKRKFKGRLKSISREPSPAPGPNLEDSGLLPKPIFSCSFPTRMPGDKRSPR
ITGLCPFGPREILVADEQNRALKRFSLNGDYKGAVPVPEGCSPCSVAALQGAVAFSAGAR
LYLISPDGEVQWRRALSLSQASHAVAAMPSGDRVAVSVSGHVEVYNMEGSLATRFIPGGK
ANRGLRALVFLTTSPQGNFVGSDWQQNSVVVCDGLGQVIGEYGGPGLHGCQPGSVSVDKK
GYIFLTLREVNKVVILDPKGSLLGDFLTAYHGLEKPRVTTMVDGRYLVVSLSNGTIHIFR
VRSPDS
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgcaagcagcaccgactttttcacatttgctgaacgtatgcaaggaaaagggcggctcc
ttcgctcaagagcaggtggctggaggacccacaagaccagaagaaaacttctggccattc
agcatggtgtcccagggatcctcgccttctctcctggaggccctgagcagtgacttcttg
gcctgtaaaatctgcctggagcagctgcgggcgcccaaaaccttgccctgcctgcacacc
tactgccaggactgcctagcccagctggctgacggcggccacctccgatgccccgagtgc
cgtgagaatgtgcccgtgccgccagcaggcgtggctgccttcaagaccaacttctttgtc
aacgggctcctggatttagtgaaggctcgggctggtggagacctgcgtgcagggaagcca
gcctgtgccctgtgccccctgatggggggtgccagtgctgggggtccagccacagcccga
tgcctagactgtgctgatgacttgtgtcaggcctgtgccgatggccaccgctgcacccgg
cagacacacacccaccgagtggtggacctggtgggctacagggcagggttgtatgacgag
gaggcccgggagcgccaggcagcccagtgcccccagcacccgggggaggccctgcgattc
ctgtgccagccctgttcccagctactgtgccgtgagtgtcgcctggacccccacctggac
cacccctgcctccccctggctgaagctgtgcgtgcccggagaccaggccttgaagagcta
ctggcgggtgtggacaagagcctggctgagctggaggctgcgaggatggtggaaaaggaa
gccttagcctgcctgcgggaacaggtggccagggtgggaacacaagtggaggaggctgct
gagggggttctccgagccctcctggcccagaagaaggaggtgctggggcagctacgggcc
cacatggaagctgcagaggaggctgctcgggagaggctgggggagctggagagccgggag
caggtggccagggcggcggctgcctttgcccgtcgggtgctcagcctgggtcgtgaggcc
gagatactctctctggagggggcaattgctcagaggctccagcagctgcaggggtttccc
tggatgcctggaccatccccctgtctgttgccccagctggagcttcatcctgggctccgg
gataagaactgccacttgctatggctctcctttgagaagcagcagccccaaaaggacagt
ggaaaagatggagctggaaggcaggaaggcgaggaaacccagaaccgcagagaggatgga
gcccgggccccaaaggaggacagaaccccaacaccccagaaagatggaagccagacccca
aatgtggagagagcccagaccccgaaagagggcagatcccagatgccccaagaagatgga
ggagtgcagactggtggcagatccaacaagaagaggaagttcaaaggcagactcaagtca
atttcccgggagcccagcccagcacctgggccaaacctggaggactcgggcctcctcccc
aagcccatcttttcctgcagctttcccacacggatgcctggtgacaagcggtctccccgg
atcactgggctctgtccctttggcccccgggagatcctggtggcagatgagcagaacagg
gctctgaagcgattctcccttaatggtgactacaaaggggctgtgcctgtccctgagggc
tgctccccgtgcagcgtggccgccttgcagggtgcagtggccttctcagctggggctcgg
ctctacctcatcagccctgacggggaggtgcagtggcgccgagccctgagcctgtcccag
gccagccatgctgtggctgcaatgccgagcggggaccgggtggctgtcagcgtgtcaggc
cacgtggaggtgtataacatggaaggcagcctggccacccgctttatccctgggggcaag
gccaaccggggccttcgggcgctggtgttcctgaccaccagtccccagggcaattttgtg
gggtcagattggcagcagaatagcgtggtggtctgtgatgggctgggtcaggtcattggg
gagtacggaggaccaggcttgcatggctgccagccgggctctgtgtctgtggataagaag
ggctacatttttttgaccttgcgagaggtcaacaaggtagtgatcctggacccaaagggg
tcactactaggtgacttcttgacagcctatcatggcctggaaaagccccgggtgaccacc
atggtggacggcaggtacctggtcgtgtctctcagtaacgggaccatccacatctttcgc
gtccgttctcctgacagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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