KEGG   Desulfohalobium retbaense: Dret_0741
Entry
Dret_0741         CDS       T00989                                 
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
drt  Desulfohalobium retbaense
Pathway
drt00300  Lysine biosynthesis
drt00550  Peptidoglycan biosynthesis
drt01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:drt00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Dret_0741
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Dret_0741
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:drt01011]
    Dret_0741
Enzymes [BR:drt01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     Dret_0741
Peptidoglycan biosynthesis and degradation proteins [BR:drt01011]
 Precursor biosynthesis
  Amino acid ligase
   Dret_0741
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase CBP_BcsQ LpxD MeaB
Other DBs
NCBI-ProteinID: ACV68033
UniProt: C8X0T6
Position
873832..875298
AA seq 488 aa
MPQDRPLLTTWPAVLDYVAAGHRARIDSRQVEPGDVFVALPGSTVHGSDFAPQALKRGAA
AVVAAPGTLPATLSQQNCVVHDDPREALGALAEAHFGTSRLGLELIGVTGTNGKTTVVGL
LEYALQRMGRRVGVIGTIANRWPGHEEPAALTTPGCWDLHACLSRMAADGVDTVCMEVSS
HALAQRRTAGLRFSAAVLTNVSQDHLDYHRDMESYFTAKSTLFNPSHLTENGVRVINADD
PYGRRLRTGFPGAWGYSLHSEKAQDPLLVEASVAGMDRKGIRLSCLWQGQQWVLPSPLVG
RHNGANLMAAQATLLALGFGPADAAVLSDAPPVPGRLERVENAAGLDIFVDYAHTPDALE
NVLQAMTALDGNRLLVVFGCGGDRDRTKRVPMGQAVARYADVAILTSDNPRHEDPEAIMA
DVRPGLADCPRVVEESDRKAAIALALQEMVPGDILVVTGKGHETYQDIGGVRVEFSDIRA
ICEQIQCN
NT seq 1467 nt   +upstreamnt  +downstreamnt
ttgcctcaagatcgtcctttgctaacgacctggccagcagtgctggactatgtggcagcg
ggccaccgggcccggatagattcgcggcaggtggagcccggcgatgtctttgtggcgttg
cccggcagcacggttcatggcagcgatttcgccccccaggccctaaagcggggggcggcg
gcggtcgttgcagccccgggaacgctgccagccactctgtcgcaacaaaactgcgttgtg
catgacgatccccgcgaggcgctcggggccttggccgaagcgcatttcggcacctcgcgc
ctggggcttgaactcatcggcgtgaccggcacgaatggcaagacaacggtggtcggtctg
cttgaatacgccttgcagcggatggggcgccgggtcggcgtgatcggcaccatcgccaac
cggtggccggggcatgaagagccggcggctttgacaacgccggggtgctgggatctgcac
gcctgcttgtcccgcatggctgccgatggcgtggacacggtctgtatggaggtctcgtct
cacgccttggcgcagcggcgcacggccggtctccgtttttctgccgcagtgctgaccaat
gtctctcaggaccatctcgactaccaccgggatatggagagctattttacggccaaatca
acattgttcaatccctcgcaccttacggaaaacggtgtgcgggtcatcaatgccgacgat
ccgtatggccggcgcctgcgaaccggttttcccggcgcctgggggtattcgctccactcc
gaaaaggcgcaggacccgttgttggtggaggcctcagtcgccggcatggaccgcaagggc
atccggctctcctgtctctggcaggggcaacaatgggtgctgccttcgccgctggttgga
cggcataacggcgccaatcttatggcggcccaggccaccttgctcgcccttggctttggg
cccgcagatgccgcagtcttaagcgatgctcctccggtgccgggccggctggagcgagtg
gagaacgccgcggggctcgatatttttgtggattatgcgcataccccggatgccctggag
aatgttctgcaggccatgaccgctctcgatgggaaccggctgctggtggttttcggttgt
ggcggtgatcgcgaccggacgaagcgcgttcccatgggccaagccgtcgcccggtatgcc
gatgtggcgatcttgacctcagacaatccccggcacgaagaccctgaggctatcatggcc
gacgtccggcccggccttgccgattgtccgcgggttgtcgaggagagtgaccggaaagcc
gccattgcccttgccctgcaggaaatggtgcccggcgacatccttgtggtgaccggcaaa
ggccacgaaacatatcaagatatcggtggtgtccgggtggagttcagcgatatccgggcc
atttgtgagcagatccaatgcaattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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