KEGG   Desulforamulus ruminis: Desru_2317
Entry
Desru_2317        CDS       T01518                                 
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
dru  Desulforamulus ruminis
Pathway
dru03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Desru_2317
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dru03021]
    Desru_2317
   03400 DNA repair and recombination proteins [BR:dru03400]
    Desru_2317
Enzymes [BR:dru01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Desru_2317
Transcription machinery [BR:dru03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Desru_2317
DNA repair and recombination proteins [BR:dru03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Desru_2317
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AEG60562
UniProt: F6DM95
Position
complement(2340956..2341162)
AA seq 68 aa
MMNKPSLDELMNKVDSRYTLVVAAAKRARLLTEDEMKTNQPLRIKPVTLALEEISDGYVS
YRRIKTGR
NT seq 207 nt   +upstreamnt  +downstreamnt
atgatgaataaaccttctttagatgaattaatgaacaaggtggatagccggtacaccctg
gtggtggctgccgccaagcgggcccgtttacttacagaggatgaaatgaaaaccaaccag
cctttacgcataaaacccgtaaccctggccttggaagaaatttcagacggatatgttagc
taccgtcgaattaaaacagggaggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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