KEGG   Desulfolutivibrio sulfodismutans: GD606_12485
Entry
GD606_12485       CDS       T06784                                 
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
dsd  Desulfolutivibrio sulfodismutans
Brite
KEGG Orthology (KO) [BR:dsd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dsd03032]
    GD606_12485 (topA)
   03400 DNA repair and recombination proteins [BR:dsd03400]
    GD606_12485 (topA)
Enzymes [BR:dsd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     GD606_12485 (topA)
DNA replication proteins [BR:dsd03032]
 Prokaryotic type
  DNA Topoisomerases
   GD606_12485 (topA)
DNA repair and recombination proteins [BR:dsd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      GD606_12485 (topA)
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 Toprim_3 zinc_ribbon_9 Lar_restr_allev
Other DBs
NCBI-ProteinID: QLA13023
Position
complement(2779317..2781578)
AA seq 753 aa
MAKELIIVESPAKVKTIKKFLGSAYAVEASVGHVRDLPTKTLGVDEKKDFAPQYQIIQGK
QKVVSKLREAAAKASRIYLAPDPDREGEAIAWHVAELLKAEDRPIHRIFFNEITAKAVRE
ALTHPREIDEKLFLSQQARRILDRLVGYKVSPLLWKKVKRGISAGRVQSVALRLVVEREK
ERQAFVPEEYWVFKALLAAAEPPVFEAELWKVAGKKPVIGDGETAATLRDAILKSPFAVT
AVAEKERAKSPPPPYITSTLQQAANQRLGFTAKRTMGAAQRLYEGVELGERGTVALITYM
RTDSVRIADEARQAAKDFIVDTLGPEFYPAKARYFKTKASAQDAHEAIRPVDPAVTPDDV
RSFLPREQYALYKLIWERFLASQMAEARFWDTTAEISAGTALFRAKGQRLIFPGYLKVYG
MEAGDEAKTLPPLAQGQPLTLAELKTDQKFTQPPPRYTEASLVRELEEKGIGRPSTYAAI
ISTLIDREYAKLEEKHFVPSELGTTVADLLIDHFATIMDVGFTAGMEAALDEVAEGQRDW
VALLKDFTDGFYPALDKASEDMAAVKAGKETGLVCDKCGQPMVIKFGRMGEFLACSGYPD
CKNTSNFTRTPDGGIELVARQADEPVVMGKCPDCGKDLVLKKSRTGSRFVACSGYPACKH
AEPFKTGVKCPREGCGGELVEKSSKRGKVFYSCDRYPQCDYAVWDWPVAEPCPKCGSGIL
VKKRTQARGEHLACPEKSCRYVRSLDGGETEEQ
NT seq 2262 nt   +upstreamnt  +downstreamnt
atggcaaaagagctgatcatcgtcgaatccccggccaaagtgaagaccatcaagaaattc
ctcggcagcgcttatgccgtggaggcctcggtcggccacgtccgcgacctgcccaccaag
accctgggcgtggacgagaaaaaggatttcgcgccgcagtaccagatcatccagggcaag
cagaaggtggtttccaagctgcgtgaggccgcggccaaggccagccgcatctacctggcc
ccggacccggatcgcgagggagaggccattgcctggcatgtggccgaattgctcaaagcg
gaagaccggcccatccaccgcatttttttcaacgaaatcacggccaaggccgtgcgtgag
gccctgacccacccgcgcgaaatcgacgaaaagctgttcttgtcccagcaggcccggcgc
atcctggaccggctggtgggctacaaggtttcgccccttttgtggaaaaaggtcaaacgg
ggcatctccgccggccgggtgcagtccgtggcgcttcggctggtggttgagcgggaaaaa
gagcgccaggccttcgtgcccgaggaatactgggtgttcaaggcccttttggcggccgcc
gaacccccggtcttcgaggccgagctgtggaaggtggctggcaaaaagccggtcatcggc
gacggcgagacggccgccacgcttcgcgacgccattttgaaaagccccttcgcggtcacc
gccgtggccgagaaggaacgcgccaagtccccgccgccgccctacatcacctccaccctg
cagcaggccgccaaccagcgcctggggtttacggccaagcggaccatgggcgcggcccag
cggctgtacgagggcgtggagctgggcgaacgcggcacggtggcgctgatcacctacatg
cgtaccgactccgtgcgcatcgccgacgaggcgcgccaggccgccaaagatttcatcgtg
gacacgcttgggccggagttctatccggccaaggcccgctatttcaagaccaaggcctcg
gcccaggacgcccacgaggccatccggcccgttgacccggccgtcaccccggacgacgtg
cgatcctttctgccccgggagcagtatgccctgtacaagctcatctgggagcgtttcctg
gcctcccagatggccgaggcccggttctgggacaccacggcggagatctcggcgggcacg
gccctgttccgggccaagggccagcggctgatctttccgggctatctcaaggtctacggc
atggaggccggggacgaggccaaaaccctgccgcctttggcccagggacagcccctgacg
ctcgcggagctcaagaccgaccagaagttcacccagccgcccccgcgctatacagaggcc
tccctggtgcgcgagctggaggagaagggcatcggccgtccgtccacctatgcggccatc
atctccacgcttatcgaccgcgaatacgccaagctggaagagaagcacttcgtgccgtcg
gagctgggaaccaccgtggccgacctgctcatcgaccatttcgcgaccatcatggatgtg
gggttcacggccgggatggaggccgccctggacgaggtggccgagggccagcgggactgg
gtggcgcttctcaaggatttcacggacggattttatcccgccctggacaaggcctccgag
gacatggccgcggtcaaggcgggcaaggagacggggcttgtctgcgacaagtgcggccag
cccatggtcatcaagttcggccgcatgggggagttcctggcctgctcgggctatcccgac
tgcaagaacacctcgaatttcacccgcaccccggacggcggcatcgagctggtggccaga
caggccgacgagcccgtggtgatgggcaagtgcccggattgcggcaaggatctggtgctg
aaaaaatcgcgcaccggcagccggttcgtggcctgttcgggatatccggcctgcaagcac
gccgagccgttcaagaccggggtcaaatgcccgcgcgagggctgcggcggggagctggtg
gaaaaaagctccaagcggggcaaggtgttttattcctgcgaccgctacccccagtgcgac
tacgccgtgtgggactggcccgtggccgagccctgccccaagtgcggctcgggcatcctg
gtcaaaaagcgcacccaggcccggggcgaacacctggcctgccctgaaaaatcctgccgc
tacgtgcggtccctggacggcggggagaccgaagagcaatag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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