KEGG   Dinoroseobacter shibae: Dshi_0200
Entry
Dshi_0200         CDS       T00612                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
dsh  Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsh03019]
    Dshi_0200 (rnc)
   03009 Ribosome biogenesis [BR:dsh03009]
    Dshi_0200 (rnc)
   03036 Chromosome and associated proteins [BR:dsh03036]
    Dshi_0200 (rnc)
Enzymes [BR:dsh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Dshi_0200 (rnc)
Messenger RNA biogenesis [BR:dsh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Dshi_0200 (rnc)
Ribosome biogenesis [BR:dsh03009]
 Eukaryotic type
  90S particles
   RNase
    Dshi_0200 (rnc)
 Prokaryotic type
  rRNA processing factors
   Dshi_0200 (rnc)
Chromosome and associated proteins [BR:dsh03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Dshi_0200 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: ABV91949
RoseoBase: Dshi_0200
UniProt: A8LLD9
Position
199101..199790
AA seq 229 aa
MKLSKEISAFCDRIGHRFDRPELLVRALTHASRSTAGRSDNQRLEFLGDRVLGLVMAEAL
LEADPQAREGQLAPRYNALVRKETCAEVAREIGLGDVLRLGRSEMLTGGRRKDALLGDGM
EAVIAAVYRDAGFEAAKALILRLWGKRIGAVEADARDPKTALQEWAQARGLPPPAYIESA
RSGPDHAPVFTISARLETGACAEAQAGSKRQAEQAAAKALLAQVESNHD
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgaagctgtccaaggagatttccgcgttttgcgaccggatcgggcatcggtttgaccgg
cccgagcttctggtgcgggccctgacccatgcctcgcgcagcaccgccgggcgcagcgac
aatcaacggctggaattcctcggcgaccgggtgctcggcctggtgatggccgaggcgctg
ctggaggcggacccgcaggcccgcgagggccagttggcgccgcgctacaacgcgctggtg
cgtaaggagacctgcgccgaggtcgcccgcgagatcgggctgggcgatgtgttgcggctg
ggcaggtcggagatgctgaccggcgggcggcgcaaggacgcgctgctgggcgacgggatg
gaggcggtgattgccgccgtctaccgggatgcggggttcgaggcggccaaggcgctgatc
ctgcggctctggggcaagcggatcggggcagtggaggccgatgcccgcgaccccaagacc
gcgttgcaggaatgggcgcaggcgcgcggcctgccccccccggcctatatcgaaagtgcc
cggagcgggccggaccatgcgccggtcttcacgatctcggcccgacttgagaccggcgcg
tgcgccgaggcgcaggcgggcagcaaacgacaggcggagcaggcggcggcgaaggccctt
ctggcccaggtagagagcaatcatgactga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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