KEGG   Dinoroseobacter shibae: Dshi_2598
Entry
Dshi_2598         CDS       T00612                                 
Name
(GenBank) binding-protein-dependent transport system permease
  KO
K02033  peptide/nickel transport system permease protein
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Dshi_2598
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:dsh02000]
    Dshi_2598
Transporters [BR:dsh02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Dshi_2598
SSDB
Motif
Pfam: BPD_transp_1 BPD_transp_1_N
Other DBs
NCBI-ProteinID: ABV94331
RoseoBase: Dshi_2598
UniProt: A8LHZ7
Position
2762572..2763510
AA seq 312 aa
MIGVFAGLLLRALVVLTGAALATFALLWHAPGDPALAIAEARYGQNVSKEVLDFIRAEAG
FDDGFWTAFWAWLAPLMQGDFGQSSVNGRDVWPDLVTAMSYTFPLALVSLALGLAVSVPL
ALIATRRPGSWLDRGAVALASVGVAIPAFWLGLLLILLFAVQLGWLPAMGAETTTHSILP
AMTLGFGVAASLTRIIRSGILEARGQPFLPAFTRRGVARRDIARDHVAPHAAVPVVTVLG
LELAFLLEGLVVVEVIFARPGLGSFLVNAIFARDFPKVQAVVILAAVVFVVVNLAIDLIY
RSLDPRVSGRDA
NT seq 939 nt   +upstreamnt  +downstreamnt
atgattggcgtctttgcgggtctcttgctgcgcgccttggtcgttctcaccggcgcggct
ttggcgacattcgcactattgtggcacgcaccaggcgaccctgctttggcgattgcagaa
gcgcgctatggccagaacgtatccaaagaggttctggatttcatccgggccgaggccggg
tttgacgacgggttctggacagccttctgggcctggcttgccccgcttatgcagggtgat
tttggtcagtcttccgtcaatggccgagacgtctggcctgaccttgtgacggcgatgtcc
tacacgtttccgcttgcgctcgtgagcttggcactcggcttggccgtctctgtccccctt
gccctgattgccacgcgcagacccggcagttggctggatcgcggggccgttgccctggcc
tcggttggcgtcgccatcccggctttctggcttgggctgctgttgatcctgctcttcgcc
gtgcagcttggctggttgcctgccatgggggccgaaacgaccacacacagcatcttgccc
gcaatgacgctggggtttggtgttgccgcgtccctcacgcgcattatccgctcgggcatt
ctggaggcacgcggacagcctttcctgccagccttcactagacggggcgtcgcgcgccgc
gacattgcccgcgaccacgtcgccccccacgctgccgtgcccgtcgtcaccgtgctcggt
ctggaactcgccttcctgttggaagggcttgtcgtggttgaggtgatttttgcgcgaccc
ggtctcggaagctttctcgtaaacgccatctttgcgcgcgatttcccaaaggtgcaggct
gttgtcattctggctgcggttgtctttgtcgtggtaaaccttgccatcgacctgatctat
cgcagccttgatcccagagtgagtgggcgcgatgcgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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