KEGG   Dinoroseobacter shibae: Dshi_2639
Entry
Dshi_2639         CDS       T00612                                 
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
  KO
K01955  carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh00240  Pyrimidine metabolism
dsh00250  Alanine, aspartate and glutamate metabolism
dsh01100  Metabolic pathways
dsh01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    Dshi_2639 (carB)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Dshi_2639 (carB)
Enzymes [BR:dsh01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.5  carbamoyl-phosphate synthase (glutamine-hydrolysing)
     Dshi_2639 (carB)
SSDB
Motif
Pfam: CPSase_L_D2 CPSase_L_D3 MGS ATP-grasp ATPgrasp_Ter ATP-grasp_3 ATP-grasp_5 CoA_binding_2
Other DBs
NCBI-ProteinID: ABV94372
RoseoBase: Dshi_2639
UniProt: A8LI38
Position
2794515..2797832
AA seq 1105 aa
MPKRTDIKSIMIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPGL
ADATYIEPITPEIVAKIIEKERPDALLPTMGGQTGLNTSLALEEMGVLAKYGVEMIGAKR
EAIEMAEDRKLFREAMDRLGIENPRATIATTMDECMAALDDIGLPAIIRPAFTLGGTGGG
VAYNRDDYEHFCKSGLDASPVNQILIDESLLGWKEFEMEVVRDKADNAIIVCAIENVDPM
GVHTGDSITVAPALTLTDKEYQIMRNGSIAVLREIGVETGGSNVQWAVNPADGRMVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELDNDITKVTPASFEPTIDYVVTKIPR
FAFEKFPGAEPNLTTAMKSVGEAMSIGRTFHESVQKALASMETGLTGFDEIAIPGISADH
RSDAPDTAAVVKALARQTPDRLRVIAQAMRHGLSDDEIQAATSYDPWFLARIREIVETEA
QVRRDGLPLEAEGLRKLKMMGFTDARLAKLTGRDEGQVRRARTRLGVTAQFKRIDTCAAE
FEAQTPYMYSTYETPVMGEAECESRPTDATKVVILGGGPNRIGQGIEFDYCCCHACFALT
EAGYETIMVNCNPETVSTDYDTSDRLYFEPLTFEHVMEILRAEQENGTLHGVIVQFGGQT
PLKLANALEAEGIPILGTTPDAIDLAEDRERFQALVNDLGLKQPHNAIASTDAEAFAAAG
DIGFPLVIRPSYVLGGRAMEIVRDMGQLERYIAEAVVVSGDSPVLLDSYLAGAVELDVDA
LCDGENVHVAGIMQHIEEAGVHSGDSACSLPPYSLSDDVLARIRVQTEALARALRVKGLM
NVQFAIKDDEIYLIEVNPRASRTVPFVAKATDSAIASIAARLMAGEPLSNFPLRDPLPHD
APEDQHLPIGDPMTLAHPDTPWFSVKEAVLPFARFPGVDTILGPEMRSTGEVMGWDRSFP
RAFLKAQMGAGTVLPTEGTVFLSIKEADKTEMLVETAAMLTELGLDIVATRGTAAFLKDH
GIASKVVNKVYEGRPDVVDMLKDGRIALVMNTTEGAQAVNDSREIRSVALYDRIPYFTTL
AASHAAAQAMIARREGEIGVRALQG
NT seq 3318 nt   +upstreamnt  +downstreamnt
atgcccaagagaaccgatatcaagtcgatcatgatcatcggagccgggcccatcatcatc
gggcaggcctgcgagttcgactattccggggcccaggcctgcaaggcgctgcgcgaagag
ggctaccgggtgatcctggtcaactccaaccccgccaccatcatgaccgacccgggcctg
gccgacgccacttatatcgagccgatcacccccgagatcgtcgccaagatcatcgagaag
gagcgcccggacgcgctcttgccgaccatgggcggtcagaccgggctgaacacctcgctc
gcgctcgaagagatgggcgtgctggcgaaatacggggtcgagatgatcggcgccaagcgc
gaagccatcgagatggccgaggaccgcaagcttttccgcgaggcgatggatcgcctcggc
atcgagaacccccgtgccaccatcgccacgaccatggacgaatgcatggctgcgctggac
gatattggcctgccggcgatcatccggcccgccttcaccctcggcgggaccgggggcggc
gtggcctacaaccgggacgattacgagcatttctgcaaatccgggctcgatgcctcgccg
gtcaaccagatcctgatcgacgagagcctgctgggctggaaagagttcgagatggaggtg
gtccgcgacaaggcggacaatgcgatcatcgtctgcgccatcgagaacgtcgatccgatg
ggcgtgcatacgggcgattcgatcaccgtggccccggcgctgaccctgaccgacaaggaa
taccagatcatgcgcaacggctcgatcgccgtgctgcgcgagatcggggtggaaaccggc
ggctccaacgtgcagtgggcggtcaaccccgccgacgggcgcatggtggtgatcgagatg
aacccgcgggtgtcgcggtcctcggcgctggcctccaaggccacgggctttcccatcgcc
aagatcgccgcgaaacttgccgtgggctataccctggacgagctcgacaacgacatcacc
aaggtcacgcccgccagcttcgagccgaccatcgactatgtcgtgaccaagatcccgcgc
ttcgcgttcgaaaaattccccggcgccgagccgaacctgaccacggcgatgaaatccgtg
ggcgaggccatgtccatcggccgcaccttccacgaaagcgtgcagaaggcgctcgcctcg
atggagaccgggctgaccggcttcgacgagatcgccatccccgggatttctgcggaccac
aggtcggacgcccccgacaccgccgccgtggtcaaggcactggccaggcagacgcccgac
cggctgcgcgtgattgcccaggccatgcgccacgggctgagcgatgacgagattcaggcc
gcgacctcatacgatccgtggttcctcgcgcgcatccgcgagatcgtcgagaccgaggca
caggtgcgccgcgacggcctgccgctggaggccgagggcctgcgcaagctcaagatgatg
ggcttcaccgatgcgcggctggccaagctgacgggccgggacgagggccaggtccgccgc
gcccgcacccggctcggtgtgaccgcgcagttcaagcggatcgacacctgcgcggccgag
ttcgaggcccagacgccttatatgtactcgacctacgaaaccccggtgatgggcgaggcc
gaatgcgaatcgcggcccacggacgccaccaaggtggtcatcctcggtggcgggccgaac
cggatcggccaggggatcgagttcgactactgctgctgccatgcgtgtttcgcgctgacc
gaggcgggctacgagaccatcatggtcaactgcaaccccgagaccgtttcgaccgattac
gacacctcggaccggctctatttcgagccgctgaccttcgagcatgtgatggagatcctg
cgcgccgaacaggagaacggcacgctgcacggggtgatcgtccagttcggcggccagacc
cccctgaagctcgccaatgcgctggaggccgaaggcatcccgatcctcgggaccacgccc
gatgccatcgatctggccgaggatcgcgagcggttccaggcgctggtcaacgacctgggc
ctcaaacagcctcacaacgccatcgccagcaccgatgccgaggccttcgccgccgcgggc
gacatcggcttcccgctggtcatccggccgtcctatgttctgggcgggcgcgcgatggag
atcgtgcgcgacatgggtcagttggagcggtatatcgccgaggcggtggtggtctcgggc
gacagcccggtactgctcgacagctatctcgccggcgcggtggagttggacgtggacgcg
ctctgcgatggggagaacgttcatgtggcgggcatcatgcagcatatcgaagaggcgggc
gtccattccggcgacagcgcctgttccctgccgccctattcgctctccgacgacgtgctg
gcgcgcattcgcgtgcagaccgaggcactggcgcgcgccctgcgggtcaagggcctgatg
aacgtgcaattcgcgatcaaggatgacgagatctacctgatcgaggtgaacccgcgcgcc
tcgcgcaccgtgcccttcgtggccaaggccaccgacagcgcaatcgcgtccatcgccgcc
cggctgatggcgggcgagcccctgtcgaatttcccgctgcgcgaccccctgccccatgac
gcacccgaggaccagcacctgccgatcggcgacccgatgacgctggcgcacccggatacg
ccctggttctcggtcaaggaggcggttctgcccttcgcgcgcttcccgggcgtcgacacg
atcctcggcccggaaatgcgctccaccggggaggtgatgggctgggaccggtccttcccc
cgcgccttcctgaaggcacagatgggcgcgggcaccgtactgccgacggaaggcacggtg
ttcctgtcgatcaaggaagccgacaagaccgagatgctggtggaaacggcggcgatgctg
accgaactgggcctcgacatcgtcgcgaccagagggaccgcggccttcctgaaggatcac
ggcatcgcctccaaggtcgtcaacaaggtctacgagggccgcccggacgtggtcgacatg
ctcaaggacgggcgcatcgcgctggtgatgaacaccaccgagggcgcgcaggcggtcaat
gacagccgcgaaatccggtccgtcgcgctctatgaccgcatcccctacttcaccacgctg
gcggccagccatgccgcggcccaggccatgatcgcccgccgcgagggcgagatcggcgtc
cgcgcgttgcagggatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (54)   

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