KEGG   Dinoroseobacter shibae: Dshi_3985
Entry
Dshi_3985         CDS       T00612                                 
Symbol
virB9
Name
(GenBank) TrbL/VirB6 plasmid conjugal transfer protein
  KO
K03201  type IV secretion system protein VirB6
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Dshi_3985 (virB9)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dsh02044]
    Dshi_3985 (virB9)
Secretion system [BR:dsh02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Dshi_3985 (virB9)
SSDB
Motif
Pfam: TrbL
Other DBs
NCBI-ProteinID: ABV95713
RoseoBase: Dshi_3985
UniProt: A8LU05
Position
pDSHI03:43526..44602
AA seq 358 aa
MSVVTYFVETSQAYLDTAAETQFGAVAATVGTLLVLGTTLVVILVGINMIYQYRAMDGHT
AFWLAVKIGLIGIFATNWMQFNAFSSAILYGIDSIAGALIASVGGGSPGPSGTFAEEFDR
LIAELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVM
IFLTLFEVTKDYFTRWLSALISFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGAL
IPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGGQQAYNRYLIG
GASGAEYAALRARQFFGVQQMPARQGMGQKGSGGSTGSADSGSKMLAQLARLARLGRR
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgagtgtcgtcacctacttcgttgaaacctcccaagcctatctcgacaccgccgctgag
acccagtttggtgcggttgcagcaacggtcggcacgctcctggttttggggacaacgctg
gtagtgatcctcgtcggaatcaacatgatctatcaatatcgggccatggatgggcacaca
gccttctggctcgcggtcaagatcgggctcatcgggatattcgcgaccaattggatgcag
ttcaacgcgttctcgtcagccattctctatgggatcgacagtatcgcgggtgcgctgata
gcctccgtcggcggcggcagtccggggccctctggaactttcgccgaagaattcgaccgg
ctgatcgcggaactgggcgactatttgaacgctgccgggtccgaactgaactggatggcc
ggcgccatgctcgacatcgtcggtgttcttctgctctcaatcctcggcggactggccgcc
ttcatcctcgtggcctcccgcctgatgatcgcgctcctgatcgggatcgccccggtgatg
atcttcctgaccctcttcgaggtcaccaaggattatttcacgcgctggctgtccgcgctg
atttcctttgcgctataccccatcgtcgtcgcaggcgtgttcgcaacgatcacaggcgtt
tcctccgcactcatcggtgaactaggcgatcccgaaggggcctcaaacatcggcgcgctc
atccccttcttcatgatggtgctcatggccaagggtttcattatcgccacgcccttcatc
gtccgcgcgatctccggcaacatcatgatgcccgccctctccggaggtctcggcggcggc
tacagctttgcccgcgccgccatgggaggtcagcaggcctacaatcgctacctcatcggc
ggggccagtggcgcagaatacgcagccctcagggcgcggcagttctttggcgtgcagcag
atgcctgcaaggcaaggcatggggcagaagggttccggaggaagcacaggatccgcagac
tcgggatcaaaaatgctggcgcagcttgcgagactggcacgacttggtcgacggtga

  All links  
Gene (7)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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