KEGG T01065: Dsim

Drosophila simulans: Dsimw501_GD21053

Entry

Dsimw501_GD21053  CDS       T01065

Symbol

Dsim_GD21053

Name

(GenBank) uncharacterized protein

K12622

U6 snRNA-associated Sm-like protein LSm3

Organism

dsi Drosophila simulans

Pathway

dsi03018

RNA degradation

dsi03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:dsi00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dsimw501_GD21053 (Dsim_GD21053)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dsimw501_GD21053 (Dsim_GD21053)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsi03019]
    Dsimw501_GD21053 (Dsim_GD21053)
   03041 Spliceosome [BR:dsi03041]
    Dsimw501_GD21053 (Dsim_GD21053)
Messenger RNA biogenesis [BR:dsi03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Dsimw501_GD21053 (Dsim_GD21053)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     Dsimw501_GD21053 (Dsim_GD21053)
Spliceosome [BR:dsi03041]
Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    Dsimw501_GD21053 (Dsim_GD21053)
Complex C
  U2 snRNP components
    Dsimw501_GD21053 (Dsim_GD21053)

SSDB

Motif

Pfam:

LSM DUF150_C TIG_SUH HydF_dimer Glutaredoxin

Other DBs

NCBI-ProteinID:

KMZ05433

Position

AA seq 103 aa
MADETEQLSQVILPVKEPLDLIRLSLDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEE
TVTTVEIDEETYEEVYKTAKRTIPMLFVRGDGVILVSPPMRVG

NT seq 312 nt +upstreamnt +downstreamnt
atggccgacgaaacagagcagctcagtcaggtgattttgccggtgaaggagcctctggat
ctcatccgattgagtttggatgagaaggtgtacgtaaagatgcgcaacgagcgggaactg
cgaggacgtcttcacgcctttgatcagcatttgaacatggtgctgggcgatgcggaggag
acggtgaccacagtggagattgacgaggagacctacgaggaagtgtataagaccgccaag
cgcactattcccatgctattcgttagaggcgatggtgtcatcctggtttcgccacccatg
cgggtgggttag

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (7)   

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