KEGG   Dickeya solani IPO 2222: A4U42_03245
Entry
A4U42_03245       CDS       T04410                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
dso  Dickeya solani IPO 2222
Pathway
dso00040  Pentose and glucuronate interconversions
dso01100  Metabolic pathways
dso02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:dso00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    A4U42_03245
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A4U42_03245
Enzymes [BR:dso01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     A4U42_03245
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: ANE74433
Position
796916..798094
AA seq 392 aa
MNKASGRSFTRTSKCLLAALIAGMMTSGVSAAELVNSKALESAPVAGWASQNGSTTGGAA
ATSDNIYVVTNISEFTSALSAGAVAKIIQIKGTVDISGGTPYKDFADQKARSQINIPANI
TVIGIGTDAKFINGSLIIDGTDGTNNIIIRNVYIQTPIDVEPHYEKGDGWNAEWDGMNIT
NGAHHVWVDHVTISDGSFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLFDQHDKT
MLIGHSDTNSAQDKGKLHVTLFNNVFNSVTERAPRVRYGSVHSFNNVFKGDVKDPVYRYL
YSFGIGTSGSVLSEGNSFTIANLSASKACKVVKKFNGSIFSDKGSVLNGSAADLSGCGFS
AYTSAIPYVYAVQPMTTELAQSITDNAGSGKL
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgaataaagcatcaggacgctcttttacccgcacctcaaaatgtctgctggcagcactg
atcgctggcatgatgacctctggtgtttccgccgccgaactggttaatagcaaagcgctg
gaatctgcgcccgtcgctggctgggcgtcgcaaaacggctccaccaccggcggcgccgct
gcaaccagcgacaatatctacgtcgttaccaatattagcgaattcaccagtgcgctcagc
gccggcgccgtcgcaaaaatcatccagatcaaaggcacggtcgatatcagcggcggcacg
ccctacaaagatttcgctgaccagaaagcccgcagtcaaatcaacattccggctaacatc
accgtgatcggaattggcaccgacgccaaattcatcaacggctctttgatcatcgacggt
accgacggcaccaataacatcatcatccgtaacgtctacatccagacgccgattgacgta
gaaccgcattacgaaaaaggcgacggctggaacgccgaatgggatggcatgaacatcacc
aacggcgcccaccatgtgtgggtcgaccacgtcactatcagtgacggcagctttaccgat
gacatgtacaccaccaaagacggcgaaacttacgttcagcacgatggcgcgctggatatc
aaacgtggttccgactacgttaccatctccaacagcctgttcgatcagcacgacaagacc
atgctgattggtcacagcgacaccaactccgctcaggataaaggcaagctgcacgtcacg
ctgtttaacaacgtgttcaacagcgtaaccgagcgcgcgccgcgcgtacgctacggcagc
gtccacagcttcaacaacgtcttcaagggtgatgtaaaagatccggtgtaccgttacctg
tacagcttcggtatcggcaccagcggcagcgtgctgtctgaaggcaacagctttaccatc
gctaacctgagcgccagcaaagcgtgcaaggttgtgaagaaattcaacggctccattttc
tccgacaagggttccgtcctgaatggcagcgccgccgatctgtccggttgtggtttcagc
gcttataccagcgctattccttacgtttacgccgttcagccgatgaccaccgagctggcg
caatccattaccgacaacgcaggctcaggcaaactgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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