KEGG   Dickeya solani IPO 2222: A4U42_03575
Entry
A4U42_03575       CDS       T04410                                 
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
dso  Dickeya solani IPO 2222
Pathway
dso03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dso00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A4U42_03575 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dso03019]
    A4U42_03575 (pcnB)
Enzymes [BR:dso01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     A4U42_03575 (pcnB)
Messenger RNA biogenesis [BR:dso03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     A4U42_03575 (pcnB)
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: ANE74487
Position
868781..870148
AA seq 455 aa
MNRENEPVRADNPPLAITVVPRDQHAISRSDISENALKVLYRLSKAGYEAYLVGGGVRDL
LLGKKPKDFDITTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEVIEVATFRGHHEQHQE
QETKNAAQQGQNGMLLRDNIFGTIEEDAQRRDFSINSLYYSIADFTVRDYTNGLNDLHQG
LIRLIGEPETRYREDPVRMLRAVRFAAKLDMRISSETAEPIPRLASLLHDIPPARLFEES
LKLLQAGYGYPTYQLLCEYQLFQPLFPLISRYFTANGESTMERMIVQVLKNTDQRIQNDM
RVNPAFLFSAMLWYPLVEHAQKLTQESGLAYFEAFALAMNDVLDEQCRSLAIPKRITSLI
RDIWQLQLRLSRRQGKRAFKLMEHPKFRAAYDLLSLRAEIENHQELQRLTQWWGEFQVAA
PPRQQVMLNTLDDGPSPHRRSRRPRKRPARRDNAR
NT seq 1368 nt   +upstreamnt  +downstreamnt
ctgaatcgtgagaatgagcccgtcagggcggacaatccgccgctggcgataacggtcgtt
ccccgtgaccagcatgccatttcacgcagcgacattagtgagaatgcgctgaaagtactg
tatcgcctgagcaaagcgggctatgaggcttatctggtgggcggcggcgtccgcgacctg
ctgttgggcaaaaaacccaaagacttcgatatcaccaccaacgccaccccggaacaggtc
cgcaagttgttccgcaactgccgactagtgggccgtcgtttccgtctggcacatgtgatg
ttcggcccggaagtcattgaggtcgccacattccgcggccaccacgaacagcatcaggaa
caggaaacgaaaaacgccgcccagcaaggccaaaacggtatgctgctgcgcgacaacatt
ttcggcaccatcgaggaagacgcccagcggcgcgacttctccatcaacagtctctattac
agcatcgccgacttcaccgttcgcgactacaccaacggtctgaacgacctgcatcagggg
ttgattcgcctgattggcgaaccggaaacccgctaccgcgaagacccggtgcgtatgctg
cgcgccgtgcgattcgccgccaaactcgatatgcgcatcagctcggaaaccgccgagccg
attcctcgtcttgcctcgttgctgcacgacattccgccggcgcggctgtttgaagaatcc
ctgaaactgctgcaggcgggttacggctatccgacttatcagttgctgtgcgaataccag
ctgtttcagccgctgtttccgctgatcagccgctacttcaccgctaacggcgaaagcacc
atggagcggatgatcgtacaggtgctgaaaaacaccgatcaacgcatccagaacgacatg
cgcgtcaacccggcgtttctgttctccgccatgttgtggtacccgctggtggaacacgcc
caaaaactgacgcaggagagcgggctggcctactttgaagcgttcgccttagccatgaac
gacgtactggacgaacagtgtcgctcgctggcgatccccaaacgtattacctcgctgatc
cgcgatatctggcaattgcaactgcgtctgtcgcgccgtcagggcaaacgcgcctttaag
ctgatggaacacccgaaattccgcgccgcctatgacctgctcagcctgcgtgcggaaatc
gaaaaccatcaggagctacagcgtctgacgcagtggtggggagagtttcaggtcgccgca
ccgccgcgccagcaggtgatgttgaacacactggatgacggcccatcgccgcatcgccgc
tctcgccgtccgcgcaagcgcccagcccgccgggataacgcccggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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