KEGG   Dickeya solani IPO 2222: A4U42_05015
Entry
A4U42_05015       CDS       T04410                                 
Name
(GenBank) ABC transporter substrate-binding protein
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
dso  Dickeya solani IPO 2222
Pathway
dso02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:dso00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A4U42_05015
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:dso02000]
    A4U42_05015
Transporters [BR:dso02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    A4U42_05015
SSDB
Motif
Pfam: SBP_bac_6 SBP_bac_8 Phosphonate-bd
Other DBs
NCBI-ProteinID: ANE74739
Position
complement(1177978..1179030)
AA seq 350 aa
MKKLLSSVLISSALFSTAVMAQDLAALEKAARAEGEVNSVGMPDSWANWKDTWDDLSAKY
GLKHSDTDMSSAQEIAKFAAEKENASADIGDVGVAFGPVAVQKGVSQPYKPTTWEQVPDW
AKDKDGHWAMAYTGTIAFIVDKQQVKEIPHSWADLQKGNYVVTIGDVGTASQASSGVLAA
SFALGGNEKNLKPALDFFAKLAKEGRLGLTNPAIANIEKGEVQVGVVWDFNGLNYRDKIN
KDRFEVLIPSDGSVISGYTTIINKYAKHPNAAKLAREYIFSDAGQINLARGYARPIRAQH
ITLPDDVKAKLLPQEQYKNAHPIADAEAWDKTVKALPRLWQENVIINMKQ
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgaaaaaattgttgtcttctgtgttaatcagcagcgcgttgttttcgaccgccgtcatg
gcgcaggatctggcggcgctggaaaaagccgcccgtgccgaaggcgaagttaacagcgtc
ggcatgccggacagctgggccaactggaaagatacctgggacgatttgagcgccaaatat
ggcctgaaacacagcgataccgacatgtcttccgcgcaggagatcgccaagttcgccgcc
gagaaagagaacgccagcgcggatatcggcgacgtgggcgtcgctttcggtccggtggcg
gtgcaaaaaggcgtgagccagccgtacaagccgaccacctgggaacaggtgccggactgg
gcgaaagacaaggacggccactgggcgatggcttacaccggcaccattgcgtttatcgtc
gataaacagcaggtaaaagagatcccgcatagctgggcggatctgcaaaaaggcaactac
gtggtgaccatcggcgatgtcggcaccgcgtctcaggcgtccagcggcgtgctggcggcc
agtttcgcgctgggcggcaacgagaagaacctgaaaccggcgctggatttcttcgccaaa
ctggcgaaagaaggccgcctcggcctgaccaacccggcgatcgccaatatcgaaaaaggc
gaagtacaggtgggcgtggtgtgggatttcaacggcctgaactaccgcgacaagatcaac
aaggatcgtttcgaagtattgatcccgtctgacggttcggtgatctccggctataccacc
atcatcaacaaatacgctaaacacccgaacgccgccaaactggcgcgtgagtacatcttc
tccgatgccggtcagatcaatctggcgcgcggttatgcccgcccgatccgcgcccagcac
atcaccctgccggatgacgtgaaagccaaactgctgccgcaggaacagtacaagaacgcg
catccgatcgctgacgctgaagcctgggacaagacagtgaaagcgctgccgcgtctgtgg
caggaaaacgtcatcatcaacatgaagcagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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