KEGG   Dickeya solani IPO 2222: A4U42_18550
Entry
A4U42_18550       CDS       T04410                                 
Name
(GenBank) serine--tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
dso  Dickeya solani IPO 2222
Pathway
dso00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:dso00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    A4U42_18550
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:dso01007]
    A4U42_18550
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dso03016]
    A4U42_18550
Enzymes [BR:dso01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     A4U42_18550
Amino acid related enzymes [BR:dso01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   A4U42_18550
Transfer RNA biogenesis [BR:dso03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    A4U42_18550
 Prokaryotic type
    A4U42_18550
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N Phage_GP20 NPV_P10 YkyA TMF_TATA_bd
Other DBs
NCBI-ProteinID: ANE77161
Position
4318812..4320107
AA seq 431 aa
MLDPNLLRNELDAVAEKLLARRNFKLDVEALRTLEERRKVLQVETENLQAERNSRSKEIG
AAKSRGEDIEPLRRDVNELGEKLDAAKAELQQVLNHIETISLTIPNMPDDCVPPGKDDSE
NQEVLRWGEPRQFDFPVRDHMDLGELTGGLSMALGVKLTGARFSVMKGPVARLHRALAQF
MLDLHTSEHGYQEAYVPYLVNHNTLFGTGQLPKFGEDLFHTKPLSEEAETSNYALIPTAE
VPLTNLVRDEILDDDTLPIKMTAHTPCFRSEAGSYGRDTRGLIRVHQFDKVEMVQIVRPE
ESMQALEELTGHAEKVLQLLKLPYRKVLLCSGDMGFGACKTYDLEVWLPAQNTYREISSC
SNMWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRALVAVLENYQQADGRIEVPEVL
RPYMNGLQFIA
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgctcgatcccaatttactgcgtaatgagctagacgcagttgccgaaaaattactggct
cgccgaaattttaaactggatgtggaagcgctgcgtacgctggaagaacgccgtaaagtg
cttcaggttgaaacagaaaatttgcaggcagaacgtaactcccgatcgaaagagatcggg
gcggctaaatcgcgtggggaagacattgaaccgctgcgccgcgacgtgaatgaattgggt
gagaaactggacgcagccaaagctgaattgcagcaggtgctgaatcacattgaaacgatt
tccctgacgattcccaacatgccggatgattgtgtcccgcctggtaaagatgattcggaa
aatcaggaagttctgcgctggggcgaaccgcgtcagtttgattttccggtgcgcgaccat
atggatttaggggaactgaccggcggcctgagcatggcgctgggggtaaaactgaccggt
gcgcgtttttcggtgatgaaagggccggttgcccgcctgcatcgcgcgctggcgcagttc
atgctggatctgcacaccagtgagcatggttatcaggaagcctacgtgccttatctggtt
aaccacaatacgctgttcgggaccgggcaactgccgaagtttggcgaggacctgttccac
accaagccgttgagcgaagaagcggaaaccagcaactacgcgctgattcctaccgcggaa
gtgccgctgaccaacctggtgcgtgatgaaattctggacgacgatacgctgccgatcaag
atgactgcgcatacgccgtgcttccgttctgaagccggttcgtacgggcgcgatacccgc
ggcctgattcgcgttcatcagttcgacaaagtggaaatggtgcagatcgtccgcccggaa
gagtcgatgcaggcgctggaagaactgaccggtcatgcggaaaaagtgctgcaattgctg
aagctgccgtatcgtaaggtgctgctgtgcagcggtgacatgggctttggtgcctgcaaa
acctacgatctggaagtctggctgccggcgcaaaatacctatcgcgaaatctcgtcctgc
tccaacatgtgggatttccaggctcgtcgcatgcaggcgcgttgccgcagcaagagcgat
aagaaaacccgtctggtacatactttgaacggttctggtctggcggtagggcgcgcgctg
gttgcggtgctggaaaactaccagcaggctgacggccggatcgaagtgccggaagtatta
cgcccgtacatgaatggtctgcaatttatcgcgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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