KEGG   Dichomitus squalens: DICSQDRAFT_139194
Entry
DICSQDRAFT_139194 CDS       T03133                                 
Name
(RefSeq) hypothetical protein
  KO
K12190  ESCRT-II complex subunit VPS36
Organism
dsq  Dichomitus squalens
Pathway
dsq04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    DICSQDRAFT_139194
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dsq04131]
    DICSQDRAFT_139194
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dsq04147]
    DICSQDRAFT_139194
Membrane trafficking [BR:dsq04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    DICSQDRAFT_139194
Exosome [BR:dsq04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   DICSQDRAFT_139194
  Exosomal proteins of colorectal cancer cells
   DICSQDRAFT_139194
SSDB
Motif
Pfam: EAP30 Vps36_ESCRT-II zf-RanBP Vps36-NZF-N
Other DBs
NCBI-GeneID: 18835819
NCBI-ProteinID: XP_007368588
JGI: 139194
UniProt: R7SSQ9
Position
Unknown
AA seq 633 aa
MPLKRYTTSVDGTIPVPALLYEDEALLTSQDNVGIYDGQQKAPHHQAGTIYATTHRLFYI
DVAHPLSRSFSLDLAHVARTEHYAGLFTSSPKVTLYLHPLPPKPEAPTQIGLVDQPPSSL
APDGLQFWECEVCSNRNPIGLTSSASMVCALCGVPRSSVKASIDMPSRRAPLVSHSLSTS
LPSSSLNLSASLGLGKLSLSNSAAPSPPAASHSSSDEVACSACTFLNSPLLRECEICGTP
LPRKPTLSFSSEPHPPAKSAPASRSATPAPVDEDSDEDTDSPEKRMIRLSFRKGGDKPFY
SVLRRSLLGKAWESKQVAKPLASASRGIGISGILRTVETTAYASQTNMEDALADLEALMI
KWKDMVKLAQDLNERLTAASTVAQPLVTPGIGLPSSPSASGLSAAAPGAASRQVVEPEEA
TFIRSSLAQLGLQMANAPVTQDMVHDERKWYEELAKELAGILEGTGKGGEGMMRKRGIIA
LDEVWGGWNRARGVALIPPATFLQVLPHLPNFTLPPIRMRTFAASGLSVLHTPPYGSATF
ASRLVGVLTLVGPRTTIEIAQEEDLPIGLTQEMLDEVEMDGETCRDDGGSGVALFASRTG
SASTSADAWAANGGGEVRYWINIFRGYVWDGQE
NT seq 1902 nt   +upstreamnt  +downstreamnt
atgcctctcaagcgatacactacgtctgtagacggaacgattccagtccctgctctactc
tacgaagacgaggctttgttgacgtctcaagacaacgtcggaatttatgacggtcagcag
aaggcacctcatcatcaagctggtacaatatacgcaactacccatcgcttgttctacatc
gatgtagcccacccactctcccggtcgttctcccttgatctagcccacgtagcgcgaaca
gagcactatgccggcttgttcaccagctcgcccaaggtgaccctttacttgcacccgcta
cctcctaaaccagaggcacctacccagataggactggttgaccaacctccatcatcgcta
gcccctgatggactccagttctgggaatgcgaagtctgcagcaatcgtaaccctatcggg
ctcacgtcctcggcgtccatggtctgcgcactgtgtggcgtaccaaggtcctccgtgaaa
gcatctatagacatgccttcaaggcgagcgcctctggtctcgcactcgctgtcgacctcc
ctcccatcctcctcgctcaacctctctgcatctctcggcctcggcaagcttagtctatcg
aactctgcagcaccttcgccaccagccgcttcacacagctcttcagatgaggttgcgtgt
tctgcatgcaccttcctcaatagtcctcttctccgagagtgtgagatatgcggcactcct
ctaccgcgcaagcccaccttgtcgttctcctcagaacctcatccaccagccaaatccgca
ccagcgtcgcgctccgctactccagcccctgtcgatgaggactcggatgaagacaccgac
tcgcctgagaagcggatgattaggctgagtttccggaagggaggcgacaagccgttttac
agcgtgttgaggagaagtctcctcggcaaggcgtgggagagcaaacaggttgccaaacct
ctggcgtcggcatccaggggaatcggaatcagcggcatccttcggaccgtagagactacc
gcctacgcctcccaaaccaacatggaagacgccctggccgacctcgaggcgctcatgatc
aaatggaaagacatggtcaagctcgcccaagacctgaatgagcggctcaccgccgcatct
accgtggcccagccgctggtaactccaggcatcggtctgccctcctctccgtccgcatcc
ggccttagtgctgccgcccccggagctgcgagcaggcaagtagtggagcctgaggaggcg
accttcatccggtcgtcgctcgcgcagctcgggctgcagatggcgaacgcacccgtaaca
caggacatggttcatgacgagcgcaaatggtacgaggaacttgcgaaagagctcgctggt
atcctagagggtacggggaaaggtggagagggcatgatgcggaagcgcgggatcatcgcc
ctcgacgaagtgtggggtggctggaaccgcgcccgaggagttgcgttgataccgccggcg
acgttcctacaagtcctcccgcatctgcccaacttcacgcttcctccaatccgcatgcgt
accttcgcggcgtccggtctctcagtactccacactcctccgtacggaagcgcaacgttc
gcctccagactggttggtgtgctaaccctcgtgggtccgcggaccacgatcgagatcgca
caggaagaagatctccccattggactaactcaggagatgctcgacgaggtcgagatggac
ggtgagacttgcagggacgacggcggttccggcgtcgcgctcttcgcttcccggaccggg
agcgcgagcacatctgcggacgcatgggcggcgaatggaggcggtgaggtgcgctattgg
atcaacatattccggggttacgtgtgggacgggcaggagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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