KEGG T03133: DICSQDRAFT

Dichomitus squalens: DICSQDRAFT_175019

Entry

DICSQDRAFT_175019 CDS       T03133

Name

(RefSeq) GTP-binding protein ypt1

K07874

Ras-related protein Rab-1A

Organism

dsq Dichomitus squalens

Brite

KEGG Orthology (KO) [BR:dsq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dsq04131]
    DICSQDRAFT_175019
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dsq04147]
    DICSQDRAFT_175019
   04031 GTP-binding proteins [BR:dsq04031]
    DICSQDRAFT_175019
Membrane trafficking [BR:dsq04131]
Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    DICSQDRAFT_175019
Autophagy
  Other autophagy associated proteins
    DICSQDRAFT_175019
Exosome [BR:dsq04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   DICSQDRAFT_175019
  Exosomal proteins of other body fluids (saliva and urine)
   DICSQDRAFT_175019
  Exosomal proteins of colorectal cancer cells
   DICSQDRAFT_175019
GTP-binding proteins [BR:dsq04031]
Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    DICSQDRAFT_175019

SSDB

Motif

Pfam:

Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB DUF3873 AAA_16 FeoB_N AAA_29 AAA_22 AAA_5 AAA_25 NACHT AAA_7

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

JGI:

UniProt:

Position

Unknown

AA seq 206 aa
MPDGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGRTVKLQ
IWDTAGQERFRTIAAAYYRGAHGIIMVYDVTDGETFSNVKGWMQEIERYASEGVKKLIIG
NKSDLVEKKVVEYSLAKDFADTVSIPFIETSAKNSTNVEEAFSLLAKTIKDEVDSQPEEA
SNGTKTSSVTPGRSLNGDEDAGACSC

NT seq 621 nt +upstreamnt +downstreamnt
atgccggacgggtacgattacctcttcaagctgctgctcattggcgactctggggtcggc
aagtcatgtctgctcttgcggttcgcagaggatgcgttcacggatagctacctgagcacc
attggcgtcgacttcaaaatccggacaatagagctggaaggaaggacggtcaagctgcag
atttgggacaccgccggccaggagcgattccgcacaatcgcggccgcgtactaccgcggg
gcgcacggtatcatcatggtttatgatgtcaccgacggagagacgttctcgaatgtcaag
ggttggatgcaggagattgagcgatacgcctcggaaggcgtgaagaagctcatcatcggc
aacaagtccgacttggtcgagaagaaggtcgtcgagtactcgcttgccaaggacttcgcg
gatactgtatcaatacccttcattgagacgtcggccaaaaactcgactaacgtcgaggag
gcgttcagcctcctggcgaagacgatcaaagacgaggttgactcgcaaccggaagaggcg
tccaacggcacgaaaacgtcctcagtcacgcccgggcgcagcttgaacggggacgaagac
gctggtgcctgctcgtgctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (30)   

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