KEGG   Dichomitus squalens: DICSQDRAFT_80852
Entry
DICSQDRAFT_80852  CDS       T03133                                 
Name
(RefSeq) RdRP-domain-containing protein
  KO
K11699  RNA-dependent RNA polymerase [EC:2.7.7.48]
Organism
dsq  Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dsq03036]
    DICSQDRAFT_80852
Enzymes [BR:dsq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.48  RNA-directed RNA polymerase
     DICSQDRAFT_80852
Chromosome and associated proteins [BR:dsq03036]
 Eukaryotic type
  Gene silencing
   RNA interference (RNAi) pathway
    RDRC (RNA-directed RNA polymerase complex)
     DICSQDRAFT_80852
SSDB
Motif
Pfam: RdRP BOF
Other DBs
NCBI-GeneID: 18844365
NCBI-ProteinID: XP_007362766
JGI: 80852
Position
Unknown
AA seq 1236 aa
MNIQLEDIPCRATKWEVKEAFSGILHNHPDFYDPRANGGRPINFEITLERSHNGLPSNGK
GTLTLPDSTIGHKFFRWAMQRGNRVEVHGRKLWISRSKERIKLGLVEALNKTPYVDPKEE
AEREEKLARIHSLRVILEAVQFGIYFHRPGDPSTAHRYFSKEFEVRRDDTISGELLYDYD
HKLLRIEMGNAVTEELVEHVVIDLPNIKKSAYGSESKGNYYVCFELWQPPRFERQPRHRA
YTGDNRKDNRHFRERLPHLGGDHESISPFAFQIRLLLNDPQARYAVKSLCEEAGIRTPSK
VNINSVSCGYFSPEKLQITHQWINSYDWPIRFQLEALLRSGFAHTDDILGLCEPVSTLIR
TDGTDFVADFLRRFMDKLRSKSNGETVEQCFRKALGDERRDVHASIVDPDDSPRTRGSVQ
CAHAIITPTRVLLEGPYDTQSNRVIRKYYAYRDYFLRVEFREENRMSFRWPIEVNGRSLI
QQRFGKFLKQGLEIAGRTFRFLGYSTSGLREHTVWFMADFNHPEEGPVTPEKIRNDLGDF
TFKKSIRQPSKYAARIAQAFSGTDPSYKITIGQWEEGVPDLGTDPYEFTDGQGTISVELR
DRIWDVLCEASPDKRKLILKPSAFQIRFLGCKGIVVVDEQLEGIKLRLRDSMKKFHVEHM
REAEIEIAKAFIKPGPARLCRPLIAVLEDRGIHKQHLLALQEKAKKKVVEARDTIEQTAG
LLRDHDLGNVYGLRYILEHLRKAGVDTGKKKPRARHIMDNEFIARLIDYAQTHILSEIKH
DARIPIEEAHQLVGCADEGPAYIAAGHDPEKVICLKEGEIFACVQQPDSDEPIYIQGLVS
ISRSPHIHPGDVQRVRAIGKPPDDPDKVCFFRNLRNVVVMPSVGDRSLASMLAGGDVDGD
EFLVIKDMTLLPTTLVEPASYVGVKPEPLDRDSTVDDICDFFMEYMQSDVVGLVADLHLV
IADQSKYGTFDEDCMRLAQLCSQAVDYPKNGVPVNVENMPRKLIRAKPDWKKPEDTDYRP
ADYYESTRALGELFRNIVVKRIDPPSSSFPNGTPLTPINEPPLSDAISTALKPAILRQLR
RSHNSDADVAAQEPLFRHYARELGYICLTHAPSENTDVRLCEEEVALGAILAKCSQRRWK
KDRTHRMREHAAQLVRDVKHRRRGLGAPLREKDGEKAEEEELRAALGKGWAAWDFGMRNR
NQFGAKSFALIGLGVVCEMLEKLEQDGSGAVTAGEW
NT seq 3711 nt   +upstreamnt  +downstreamnt
atgaacatccaattagaagacattccttgccgggctacgaaatgggaagtcaaggaggct
ttcagtggcattctccacaaccacccagacttctacgacccgcgtgccaatggcggacgt
ccaatcaatttcgaaatcacgcttgagcgaagccacaacggtcttcccagcaacgggaag
ggcacacttacgctcccggacagcaccatcggtcacaaatttttcagatgggcaatgcaa
cgcgggaacagggtcgaagtacatggtaggaagctgtggatctcgagaagtaaggagaga
atcaagctgggtctcgtcgaggcgctcaacaagaccccatatgtggatccaaaggaggag
gcggagcgtgaggagaagctggcgcgtattcactccctgcgggtcattctcgaggccgtc
caattcggcatctacttccaccgtcctggagatccgagcacggcacatcggtacttttct
aaggagtttgaggttcgtagggacgatacgatctccggtgagttgctgtatgactacgac
cacaagctcttgagaatcgagatgggcaatgctgtcaccgaggagctggtcgagcacgtg
gtcattgatctgccgaatatcaaaaagagtgcttatggctctgagtccaagggcaactat
tatgtttgcttcgagttgtggcagcctccccgctttgaacgacaaccgcggcatcgagca
tatacgggcgacaaccgcaaggataacaggcatttccgcgaacggctgccccatctcgga
ggggatcacgagtccatctcgccctttgcgttccagatccggctcctcctaaacgaccca
caggcgcgttacgccgtcaagtcgctttgcgaagaggcaggcatccgaacgccgtcaaaa
gtcaatatcaattctgtgtcgtgtggctacttcagtccggaaaaactccagatcacccat
cagtggattaacagctacgattggcccatccgcttccaactcgaagctctcctgcgcagc
ggattcgcgcatactgatgatatcctgggtctatgcgagcccgtctccactctgatacgt
actgacggtaccgacttcgtcgcggacttcctgcgccgattcatggataagcttcgctcg
aagagcaacggcgaaacagtcgagcagtgcttcaggaaggcgctgggcgatgaacggcgg
gacgtacatgcttctattgtagatcccgacgactcgcctcgtacaaggggctcggtccag
tgtgcgcacgcgatcataactccaactcgtgtcctgctcgagggaccatatgacactcag
agcaaccgcgttattcgcaagtactatgcttaccgcgactacttcctgcgcgttgagttc
cgagaggagaacagaatgtcctttcgctggcccatcgaggtaaacggccgttccctcatc
cagcagcgctttgggaaattcctgaagcaaggtctcgagatcgccggtcgtacgttccgc
ttcctgggttactcgacatccggtcttcgcgaacatacagtctggttcatggccgacttc
aaccaccctgaggagggtccggtgactcctgagaagattcgtaacgatctcggtgacttc
acctttaagaaatcgattagacagccgtccaagtatgcagcgagaattgctcaggccttc
agtggcacggatccctcttacaagatcaccatcggacaatgggaagagggtgtgcctgat
ttgggaacagatccgtatgagtttacggacggacaagggaccatctcggtggaactgcgt
gatcgcatttgggacgtcctctgcgaggcctcgcccgacaagaggaagttgatcttgaag
ccttccgcattccagatccgcttcttaggttgcaaaggaatcgtcgtcgtcgacgagcag
ctcgaaggcatcaagctgcgtctccgcgactctatgaagaagttccacgtagagcacatg
cgcgaggctgagattgagatcgcgaaagctttcatcaagcctggccctgccagactgtgt
cgcccgctgatcgccgtcctcgaagaccgcggcatccacaagcaacatttgttggccctt
caggagaaggcgaagaagaaggtggtcgaagcgcgagacaccatcgagcaaacggctggg
ctcctccgcgaccatgacctcggcaacgtctacggccttcgctacatcctcgagcatcta
aggaaagctggcgtggacactggcaaaaagaaacctcgggcaaggcatatcatggacaac
gagttcattgctcgcctcatcgactacgcgcagacgcacatcctgtccgagatcaagcac
gatgcacgtatcccgatcgaagaagcacatcagctcgtgggttgtgcggacgagggacca
gcgtacatcgcggcgggtcacgaccccgagaaggtaatctgcctgaaggagggcgagatt
ttcgcttgtgtccagcagccggacagtgatgagccgatatatatccaggggctcgtgtcc
atttcgcgctcacctcacattcaccccggagatgtacaaagagtcagggccataggcaag
cctcccgatgacccggacaaggtgtgcttcttccgcaacctcagaaacgtcgtcgtgatg
ccgtctgtcggggatcggtcgctcgcatctatgctggccggaggagacgtcgacggcgac
gagtttctcgttatcaaagacatgacgcttctgcccaccacactcgtggagcccgcgtcc
tatgtgggtgtcaagcccgagccgctggatcgcgacagcaccgtagacgacatttgcgat
tttttcatggaatacatgcagtccgacgttgtgggtcttgtggcagacctgcacctggtc
atcgcagaccagtcaaagtatggcactttcgacgaggactgcatgagactcgcgcaactg
tgtagccaggccgtcgactatcccaagaacggagtgcccgtcaacgtcgaaaacatgcct
cgcaagttgattcgcgccaagccagactggaagaagccggaggacaccgactatcgcccc
gcggactactacgagtcgacgcgagcgctgggcgagctcttcaggaacatcgtagtgaag
cgcatcgaccccccctcgtcgtcgttccccaacggaacgccgctcacgccgatcaacgag
ccgcccctgtccgacgccatctcgaccgcgctcaagcccgcgatcctccgccagctccgg
cgctcgcacaactcggacgcggacgtggccgcgcaggagccgctcttccggcactacgcg
cgcgagctggggtacatctgcctgacgcacgcgccgtcggagaacacggacgtgcgcctg
tgcgaggaggaggtggcgctcggggcgatcctcgcgaagtgctcgcagcggcggtggaag
aaggacaggacgcaccggatgcgcgaacacgcggcgcagctcgtgcgcgacgtcaagcac
cggcggcgcgggcttggggcgccgctgcgcgagaaggacggggagaaggcggaggaggag
gagctgcgcgcggcgctgggcaaggggtgggctgcgtgggacttcgggatgcggaacagg
aaccagttcggggcgaagagcttcgcgttgatcgggttgggcgtcgtctgtgagatgctc
gagaagcttgagcaggacggctccggggcggtgacggctggagagtggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (42)   

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