KEGG   Dichomitus squalens: DICSQDRAFT_89680
Entry
DICSQDRAFT_89680  CDS       T03133                                 
Name
(RefSeq) ribosome biogenesis ATPase RIX7
  KO
K14571  ribosome biogenesis ATPase
Organism
dsq  Dichomitus squalens
Pathway
dsq03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    DICSQDRAFT_89680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dsq03009]
    DICSQDRAFT_89680
Ribosome biogenesis [BR:dsq03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    DICSQDRAFT_89680
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_16 AAA_22 AAA_5 AAA_33 AAA_14 TIP49 RNA_helicase Mg_chelatase AAA_2 AAA_28 nSTAND3 NACHT AAA_17 IstB_IS21 AAA_3 ABC_tran AAA_18 Zeta_toxin Rad17 TsaE Cytidylate_kin2 Parvo_NS1 AAA_7 DUF815 Viral_helicase1 Sigma54_activat NB-ARC AAA_11
Other DBs
NCBI-GeneID: 18844830
NCBI-ProteinID: XP_007368124
JGI: 89680
UniProt: R7SSN9
Position
Unknown
AA seq 752 aa
MQGLWSTHRRAKVNLNSASTLPSDSGATTPIAHAPTEQPATDSTPTDTPLDTPTAEAEPA
VASLEQKPVSAKRKLRSTREDGGKRAKLSAGSVSKDHSPPLTRLSDLGGVDACIEKMLEL
VAMPLCHPEIYLHTGVQPPRGVLLHGPPGCGKTMLAHAIAGELGVPFINVSAPSVVSGMS
GESEKTLRDTFEEAKRVAPCLLFIDEIDAITPKRESAQREMERRIVAQFLTCMDDMSWEK
NDNKPVIVIGATNRPDSLDAALRRAGRFDHEISMGVPDEEARAQILRVQSARLRLEGDFD
YVALAKATPGYVGADLAALTGAAGIIAVKRIFKQISEGTLTLPEDVLPPTDGDTSMAVDS
PAQPPPPVLQNDINKAVPFASFDVSKHTAASSIIHFLRAHPNPLTEAQLAPLCITYADFI
QALEHVQPSSKREGFATVPDVTWADIGALHATREELHMAIVQPIRRPELFSAVGIVAACG
VLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFSRARASSPCV
IFFDELDALVPRRDDNMSESSARVVNTLLTELDGLDARKSVYVIAATNRPDMIDPAMCRP
GRLDKLLYVDLPSADERVEIVRKMTRKVPLGSGTGVEGDSGVIQLMIEELVRERCEGYSG
ADLAALVREAGVSALKRTLGTLEAMEAEGGFGPGQEQHTVLVSAEDFALAAEKVQPSVSV
AQRRKYEALRSKFAGLPVRSGKEEDGKRMEEK
NT seq 2259 nt   +upstreamnt  +downstreamnt
atgcagggtctctggtcgacccataggcgagccaaggtcaacctcaactcagcttctacc
cttccttcagactctggagccactacacccatcgctcatgcgcccacggaacaacccgcg
acggactcaacacccacagacactcccctggacacgcccactgcagaggcggagcccgca
gtcgcgtccttagaacagaaacccgtgagcgcgaaacgcaaattgcgctctacacgagaa
gatggaggcaagcgggcgaagctgtctgcgggcagcgtctcgaaggaccattctccaccc
ctgacgcgcctgtccgacctcggaggagtggacgcgtgcatagagaagatgctggagctg
gtcgccatgccactgtgtcatccggagatatacctgcatacgggcgtgcagccgccgcgg
ggggtgcttttgcatggcccgccgggttgcggtaagaccatgttggcgcatgcaatcgct
ggggaactcggcgtacccttcatcaacgtatcagccccctcagtcgtctctggcatgtct
ggagagtccgagaagaccctccgcgacacgttcgaggaagcgaagagggtcgcaccatgt
ctcctcttcatcgacgagattgatgctatcacaccgaagcgcgagagcgcgcagcgggag
atggagagacgaatcgtcgcgcagttcttgacatgcatggacgacatgtcatgggagaag
aacgacaacaagcccgtcatcgtgattggtgcgacaaatcgaccagactcgctggacgct
gctctccgtcgggcgggtaggttcgaccacgaaatcagcatgggtgtcccggacgaagaa
gcgcgagcgcagatcctccgcgttcagtccgctaggctgaggttagaaggagacttcgac
tacgtggctctcgcgaaggcgacaccaggctatgtgggcgcggatctcgctgcgctcacc
ggcgccgcaggtatcatcgccgtgaagcggatatttaagcagatatcggagggcaccctc
acacttccggaggacgtcttgcctccaacagacggggacacctctatggctgttgactcc
ccagcccagcccccaccgcctgtccttcaaaatgatatcaacaaagccgtcccattcgct
agtttcgacgtctcaaagcacacagccgcatcctcgatcatccacttcctccgcgcccac
cccaaccccctcaccgaagcccaactcgcgcccctctgcatcacgtacgccgacttcatt
caagcgctggagcacgtccagccctcgtccaagcgcgaaggctttgcgacggtgccggac
gtaacatgggcggacatcggggctctgcacgcgacgcgcgaggagctgcacatggcgatt
gtgcagccgatcaggcggccagagctgttcagcgcggtcggcatcgtcgcggcgtgcggc
gtgctcttgtggggcccgcccgggtgtgggaaaacgttgttggcgaaggcggttgcgaat
gagtcgcgggcgaacttcatcagtgtgaagggcccggagttgctgaacaagtacgtgggc
gagagcgagcgtgcagttcgtcaggtattctctcgagcgcgtgcgtcctcgccttgtgtc
atcttcttcgacgagctcgacgcactcgtaccccgccgcgacgacaatatgtcagaatcc
tcggcacgcgtcgtcaacaccctcctaacagaactcgacggcctcgacgcgcgcaagtct
gtctacgtcatcgcagctaccaaccgccccgacatgatcgaccccgcgatgtgccggccc
ggccgcctcgataagctcctgtatgtcgacctgccgtcagccgacgaacgcgtcgagatt
gtgcgcaagatgacgagaaaggtgccgctcgggagcggcactggggtcgagggcgactcg
ggcgtgattcagctcatgatcgaggagctcgtccgggaacgatgcgagggctacagcgga
gcggacctcgctgcgttggtgcgcgaggcgggtgtctctgcgctaaagcggacgttgggc
acattggaggcgatggaggcagagggtggtttcgggcccggacaggagcagcacacggtg
ctagtctctgcggaggactttgcgctggcggcggagaaggtgcagccgagcgtgtccgtg
gcacaaaggcgcaagtatgaggcgctgcggtctaagtttgcggggctacctgtgcgcagt
gggaaagaggaagatgggaagcgtatggaggaaaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (43)   

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