KEGG   Deinococcus radiopugnans: QR90_03025
Entry
QR90_03025        CDS       T03508                                 
Name
(GenBank) topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
dsw  Deinococcus radiopugnans
Brite
KEGG Orthology (KO) [BR:dsw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dsw03032]
    QR90_03025
   03400 DNA repair and recombination proteins [BR:dsw03400]
    QR90_03025
Enzymes [BR:dsw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     QR90_03025
DNA replication proteins [BR:dsw03032]
 Prokaryotic type
  DNA Topoisomerases
   QR90_03025
DNA repair and recombination proteins [BR:dsw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      QR90_03025
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AIZ44302
UniProt: A0A0A7KDR1
Position
623832..624869
AA seq 345 aa
MPGRTEILQEEYLRREGNDPKKFTYFWPDGTRYEDEDGIARIASLAVPPAYTDVYVSPDA
DAELQAFGRDAAGRLQYRYHPDFVQAGALKKWQRLTRFATALPTLREVTTADLRLSGLPP
RKVMALMTRLLHVAHFRVGSDAYARQHKTYGLSTLRQRHVKVEGNLVTFNFRGKHGITQN
KATRNSTLANNIGKLLELPGPWLFQTVTEEGRRRVHAPELNAYLKEVIGPFTAKDFRTWG
GTLLAAEYLAEAGVADSERAARRVLVDCVKHVAEDLGNTPAVTRGSYICPVIFDRYLEGK
VLDDYEPRAGRLPAELEGLSRSEAALKRLLESEKALKKGRGKRAA
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgccgggacgcaccgagatcttgcaggaggagtacctgcgccgcgaggggaacgatccc
aaaaagttcacctacttctggccggacggcacgcgctacgaggacgaggacggtatcgcc
cgcatcgccagcctggccgtgccgcccgcgtacaccgatgtctacgtttcccccgacgcc
gacgccgagttgcaggcgtttggccgcgacgctgccggacgcctccagtaccgttaccac
ccggatttcgtgcaggccggggccttgaagaagtggcagaggctgacgcgcttcgccacc
gctttaccgacgttgcgtgaggtcaccaccgccgacctgcgcctgtccgggctgccgccg
cgcaaggtgatggccctcatgacccggctgctgcacgtcgcgcatttccgggtgggcagc
gacgcctacgcccggcagcacaagacctacggcctcagcactctgcgccagcgccatgtg
aaggtggagggcaacctcgtgaccttcaacttccggggcaagcacggcatcacgcagaac
aaggcgacgcgcaactcgacgctggcaaacaacatcggcaagttgctggagttgcccggc
ccgtggctgttccagacggtgacggaggagggccgccgccgcgttcacgcccccgagctg
aacgcctacctcaaggaagtgatcggccccttcaccgccaaggatttccgcacctggggc
ggcacgctgctggccgccgaatatctggccgaggcgggcgtggcggacagcgaacgcgcg
gcccgccgggtgctggtggactgcgtcaaacacgtcgccgaggatctgggcaacaccccc
gccgtcacgcgcggcagttacatctgcccggtgatctttgaccgctacctggagggcaag
gtgctggacgactacgaaccccgcgccggacgcctccctgccgagctggagggcctgagc
cgcagcgaggcggccctcaagcggctgctggagagcgaaaaggccctgaagaagggcagg
ggcaaacgggcggcgtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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