KEGG   Desulfolutivibrio sulfoxidireducens: GD604_02110
Entry
GD604_02110       CDS       T06821                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
dsx  Desulfolutivibrio sulfoxidireducens
Brite
KEGG Orthology (KO) [BR:dsx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dsx03016]
    GD604_02110 (thpR)
Enzymes [BR:dsx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     GD604_02110 (thpR)
Transfer RNA biogenesis [BR:dsx03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    GD604_02110 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: QLA18608
Position
508606..509247
AA seq 213 aa
MEHIRAFLGIPLPGAYQDGLAALGPRLAAIAPARLALTRPGSWHLTLKFLGHTPRRGPTG
IQAVGQALAGVVWEAFVLLGGGGGFFPNAARPRVVYVGLSRGARDCRELAGRVEAALSAL
GVPPEPRAFIPHLTVARVRDFPKDRGGKGGWDEVAGRLARAVWPECVVDRFVLYQSILGP
HGPRYEVVEEFPARGVAPGGGPAKGANRAGCPS
NT seq 642 nt   +upstreamnt  +downstreamnt
atggaacacatccgggcctttctcggcatccccctgccgggcgcctaccaggacggcctg
gccgcgctggggccgcgacttgcggccatcgcgccggccaggctggcgctcacgcgtccc
gggtcatggcacctgaccctgaaatttctgggccacaccccccggcgggggccgacgggc
atccaggccgtgggccaggccctggcgggcgtcgtgtgggaggcgtttgtccttttgggg
ggcgggggcggctttttcccgaacgcggcccggccccgggtggtctatgtgggactttca
cggggggcgcgggattgccgggagttggccgggcgcgtcgaggcggccctgtcggccctt
ggcgtgccgcccgagccccgggccttcatcccgcacctgaccgtggccagggttcgggat
ttcccgaaagaccggggagggaagggcggctgggacgaggtggccgggcgtctggcgcgg
gcggtgtggccggagtgcgtcgtggacaggttcgtcctgtaccaaagcattctcggcccg
cacggtccccgctacgaggtcgtggaggaatttccggcccggggggtggccccgggcggc
gggccggcgaagggtgcgaatcgggccgggtgtccatcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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