KEGG   Desulfurobacterium thermolithotrophum: Dester_0937
Entry
Dester_0937       CDS       T01427                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
dte  Desulfurobacterium thermolithotrophum
Pathway
dte03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dte00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dester_0937
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dte03021]
    Dester_0937
   03019 Messenger RNA biogenesis [BR:dte03019]
    Dester_0937
Transcription machinery [BR:dte03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Dester_0937
Messenger RNA biogenesis [BR:dte03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Dester_0937
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_22 SAP ATPase_2 Spore_III_AA OB_RNB AAA_25
Other DBs
NCBI-ProteinID: ADY73576
UniProt: F0S404
Position
complement(943035..944306)
AA seq 423 aa
MAENTLEGLTIAELQKMSIFDLRKIAKSLGIDVKAVKKQELIKRILEKDAEKRGAIFRVG
VLEVLPDGFGFLRSPENNYLPSSSDVYVSPSQIRKFGLRTGDTIAGEVRPPKENEKYFAL
LKVDAINWEPAEIAKTRPQFDQLTPLHPTERFRLEHDPSELSTRVVDLITPIGKGQRGLI
VAPPRAGKTVLLQKMANAIKTNYPDTYLIILLIDERPEEVTDMKRNTLADEVISSTFDEP
PERHAQVAEIVIEKAKRLVEHKKDVVILLDSLTRLARAYNTLTPPSGKILSGGIDAHAFH
KPKRFFGAARNIEEGGSLTIIATALVETGSRMDDVIFEEFKGTGNMEIVLDRQLVERRVF
PAINIQKSGTRKEELLLSEWELNRIWILRRLLTSMSPVESMEFLLEKLKKYKTNEDFLKA
MNA
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggcagaaaatacattagagggcttgactattgcagagctccagaaaatgagtattttt
gacctgaggaagattgctaagtctcttgggattgatgttaaagctgtaaaaaagcaagaa
cttataaagagaattctagagaaagatgcagaaaaaagaggagctattttcagagtaggt
gttttagaagttttacctgatggatttggtttcctccgttctcctgaaaataattatctt
ccaagttcaagtgatgtttatgtttctccttcccaaataagaaagtttggtcttagaaca
ggagatactattgcaggagaagtaaggcctcctaaagaaaatgaaaaatattttgctctt
ttaaaagttgatgctataaattgggaaccggcagaaattgcaaaaacaagacctcaattt
gatcagcttactccacttcatccaactgaaagatttaggcttgagcatgacccttcagaa
ctttctacaagggttgttgatttaattactcctatcggaaaaggacaaagaggtcttatc
gttgctcctccaagggcaggaaaaacagttcttcttcaaaagatggcaaatgctataaag
actaactatcctgatacttatctcatcattctcctcatagatgaaagacctgaagaagtt
acagacatgaaaaggaacactttagcagatgaggttataagttcaacttttgatgagcca
cctgaaagacatgctcaagttgcagaaattgttatagaaaaggcaaaaagattagttgaa
cacaaaaaagatgttgtcattcttcttgatagtcttacaagacttgcgagagcgtacaat
actttaactcctccaagcggaaaaattctttctggtggtattgatgctcatgcattccac
aaacctaagagattttttggagctgctagaaacatagaagaaggtggaagtcttacaatt
atagctacagctcttgttgaaactggaagtcgtatggatgatgtaatatttgaagagttc
aagggaacaggtaacatggaaattgttcttgatagacagcttgtggaaaggagagtgttc
cccgcaataaatattcaaaagtcaggaactagaaaagaagaactccttctttcagagtgg
gagttaaatagaatttggatacttagaagacttcttacatccatgtctcctgttgaatca
atggaatttctcttagagaaacttaaaaaatataaaacaaacgaagatttcttaaaggcg
atgaacgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (32)   

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