KEGG   Candidatus Desulfovibrio trichonymphae: RSDT_0174
Entry
RSDT_0174         CDS       T05578                                 
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
dtr  Candidatus Desulfovibrio trichonymphae
Brite
KEGG Orthology (KO) [BR:dtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dtr03016]
    RSDT_0174 (trmE)
Transfer RNA biogenesis [BR:dtr03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    RSDT_0174 (trmE)
 Prokaryotic type
   Methyltransferases
    RSDT_0174 (trmE)
SSDB
Motif
Pfam: TrmE_N MnmE_helical MMR_HSR1 FeoB_N Dynamin_N DO-GTPase2 RsgA_GTPase AIG1 AAA_22 ABC_tran TraD AAA_29 AAA_21 AAA_35
Other DBs
NCBI-ProteinID: BAV91686
UniProt: A0A1J1DX67
Position
complement(230226..231623)
AA seq 465 aa
MSTIAAIATPPGAGGIAIVRMCGPQAKEMLARMFLPFSPHFENFRPWMLYRGRILDSDRE
ALDDALAVFMPGPHTYTGEDMTEIHCHGGPFIVRTVLENALRLGARLAERGEFSRRAFLN
GRMELSQAEAVAEMIAAPSREALRYSLNRLEGLLGRRTLVLREKLDALRAQVCLAVDFPE
EDVECLAPQAFALAVDDVIVGVRRLLAGQKRARLMQHGALVVLAGAVNAGKSSLLNALLG
RTRALVTEFPGTTRDFLEEMCEIDGLPVCLTDTAGLRATAEPVESLGVAASHQKLREADA
IVLVLDGARLHEQGAAAPTCPDPAAVEALALAGETPVLVVWNKSDICMPKVFPPRWSAGF
PCRAVSALSGEHLDELARDLRTLVLGDGAGSATPDGIAPNVRQAGALNEALVELQALKTD
ILAGQPYDCCAVRLDTAATRLGDVTGVASPAEVLNRVFSQFCIGK
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgtccaccatagccgccatagctacgccgcccggcgcgggcggcatagccattgtgcgc
atgtgcgggccacaggccaaagaaatgctggcgcgcatgtttttgcccttttcgccgcat
tttgaaaattttcgtccctggatgctgtacagaggacgcattctggattccgacagagaa
gccctggacgacgcgcttgccgtgtttatgcctggaccgcacacctataccggcgaggac
atgacggaaattcactgtcatggcggcccgtttatcgtgcggacagttctggagaacgcg
ctgcgcctaggggcgcgtcttgcggaaaggggcgagttctcacgtcgcgcttttctgaat
ggccgcatggagttaagtcaggctgaagctgtggcggaaatgatagcggcgccctcacgc
gaggcgctgcggtacagtctcaatcgtctggagggccttctgggccgccgcacactggtc
ttgcgggaaaagctggacgcattgcgcgcgcaggtttgtctggcggtggattttcctgaa
gaagatgtggagtgtctggcgccgcaggcctttgccttggctgtagacgacgtgattgtc
ggcgtgcgccgcctgctggccggccaaaaacgggcacgactcatgcagcatggggcgctt
gtggtgctggcgggagccgtcaacgcgggcaagtcaagcctgctcaacgcccttctgggg
cgcactagggctctggtgacggaatttcccggcacaacacgtgattttttggaagaaatg
tgcgaaattgacggtctgcccgtgtgcctcacagacacagccggtctgcgggcaaccgct
gagcctgtggaaagcctgggtgtggccgcaagccatcaaaaactgcgtgaggccgacgcg
attgtgctggtgcttgacggcgcgcgcttgcacgaacaaggcgcggcggcccccacatgc
cctgacccggccgcggtggaggcactggctcttgccggggagacgcctgtgcttgttgtc
tggaacaaaagcgacatctgtatgccgaaagtattcccgccgcgctggagcgcgggattt
ccctgccgcgccgtcagcgcgctttccggagaacatctggacgaactggcgcgggatttg
cgcacccttgtgctgggcgacggcgcaggaagcgcgacgccggacggcattgcgcccaat
gtacgccaagccggagctctcaacgaagctcttgttgaactgcaggcgctcaagacggac
attctggccggtcagccctatgattgctgcgctgtgcgtctggacaccgcagcgacacga
ctgggggacgtgacgggcgtagcgagccccgcggaagtgctcaatcgtgttttttcacaa
ttctgcatcggcaagtag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (30)   

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