KEGG   Candidatus Desulfovibrio trichonymphae: RSDT_0567
Entry
RSDT_0567         CDS       T05578                                 
Symbol
hdrA
Name
(GenBank) heterodisulfide reductase subunit A
  KO
K03388  heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
Organism
dtr  Candidatus Desulfovibrio trichonymphae
Pathway
dtr00680  Methane metabolism
dtr01100  Metabolic pathways
dtr01120  Microbial metabolism in diverse environments
dtr01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:dtr00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    RSDT_0567 (hdrA)
Enzymes [BR:dtr01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.7  With an iron-sulfur protein as acceptor
    1.8.7.3  ferredoxin:CoB-CoM heterodisulfide reductase
     RSDT_0567 (hdrA)
   1.8.98  With other, known, physiological acceptors
    1.8.98.4  coenzyme F420:CoB-CoM heterodisulfide,ferredoxin reductase
     RSDT_0567 (hdrA)
    1.8.98.5  H2:CoB-CoM heterodisulfide,ferredoxin reductase
     RSDT_0567 (hdrA)
    1.8.98.6  formate:CoB-CoM heterodisulfide,ferredoxin reductase
     RSDT_0567 (hdrA)
SSDB
Motif
Pfam: Fer4 Fer4_6 Fer4_21 Fer4_7 Fer4_16 Pyr_redox_2 Fer4_10 Fer4_9 Fer4_2 DAO FAD_oxidored Fer4_22 Fer4_17 GIDA Fer4_4 FAD_binding_2 NAD_binding_8 HI0933_like Fer4_8 Pyr_redox_3 NAD_binding_9 Fer4_3 Trp_halogenase AlaDh_PNT_C Thi4 Pyr_redox Fer4_15 FAD_binding_3 FMO-like
Other DBs
NCBI-ProteinID: BAV92079
UniProt: A0A1J1DQH9
Position
749162..751123
AA seq 653 aa
MRIGVFICHCGSNIAGTVDCARVAEISTGFPDVVYATDPMYTCAEPGQVAIEAAIHDHRL
DGVVVASCSPRIHEPTFRHTVERAGLNRYMFEMANIREHVSWIGKDRDANTNKAAELVKM
ALAKLRNNRPLVAKSFEANKKVLIVGGGVAGIQAALDCADGGVPVILLERESTIGGKMAK
LDKTFPTVDCSACILGPKMVDVAQHPNITLYTYSELEDISGYIGNFTVKIHKRATYVNWE
KCTGCGVCSEKCPSKKTPDAFNELTGVTTAINIPFPQAIPKKAVISAEHCRQLTKGKCGI
CAKTCPTGAVVYDMQDDVVTEEVGCIIAATGYDLMDWTVYREYGGGQYPDVITSLQYERL
LSTSGPTGGHIRRPSDGLEPKHVVFIQCVGSRDKSVGRPYCSGFCCMYTAKQAVLTKDHL
PLSQSYVFYMDIRAPGKLYDEFTRRAVEEYGVEYIRGRVSAVYPDGEGAYVVMGVDTLLG
RPVEIKADIVVLAVGIEASRGAAALAEKLRISYDNYGFFMESHVKLKPVETNTAGVFLAG
VCQGAKDIPASVAQGSATAAKVLALFARDRLENDPQTAQVDTRRCVGCGKCIRCCPFGAL
KETTIRGEIKTDVIETVCQGCGLCTSTCPQGAVQLSHATDNQILAEVNALCRC
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgagaataggcgtttttatctgccactgcggcagcaatatcgccggtactgttgactgc
gccagagtggccgaaatatccacaggctttcccgatgtcgtctacgcgacagaccccatg
tatacctgcgccgaacctggtcaggtagccattgaggccgccatccatgaccacaggctc
gacggcgttgttgtggcatcatgcagtccgcgcatacatgagcccacattccgccacacg
gtggaacgggctggtctgaaccgttatatgtttgaaatggctaacattcgcgagcatgtt
tcctggatcggcaaagacagggacgccaacaccaacaaggccgcggaactggtgaaaatg
gcccttgccaagctgcgcaacaaccggcctcttgtggcgaagtcctttgaagccaacaaa
aaagtgttgattgtaggcggcggcgtcgccggcattcaggcggcgctcgactgcgctgac
ggaggcgttcctgttattctgctggagcgggagtcaaccatcggcggcaagatggcaaaa
ctcgacaaaacctttcccacagtggactgttcagcctgcattcttggcccaaaaatggtg
gatgtggctcagcaccccaacatcaccctgtacacatattccgaacttgaagatatttca
ggatatataggcaattttacagtcaaaatccacaagcgcgccacctatgtcaactgggag
aaatgcacaggctgcggggtgtgcagcgaaaaatgccccagtaaaaaaacgccggacgct
tttaatgaattgaccggcgtcacaacagccatcaacattccctttccgcaagccattccc
aaaaaggccgtcatcagtgccgaacactgccgtcagcttaccaaaggcaagtgtggcatc
tgcgccaaaacctgccctaccggcgctgttgtctacgacatgcaggacgacgtcgtcact
gaagaagtgggctgcattatcgcggccacgggctatgaccttatggactggacagtgtac
cgagaatacggcggcggacaatacccggacgtgataacttctctgcagtacgagcgactt
ctttcaacctctggccccaccggcgggcatatcagacgcccctctgacggtctggagccg
aaacacgtcgtttttatccaatgcgtgggttcacgcgacaaatctgtcggccgcccctac
tgttccggcttctgctgcatgtacacggcaaagcaggcggtgctgacaaaggatcacctg
ccgctttcccaatcgtacgtcttttatatggacatacgcgcgcctggcaagctctatgac
gaatttacccgccgcgctgttgaggaatacggcgttgagtacatacgcgggcgcgtatcc
gccgtttaccctgacggagagggcgcctacgtcgtcatgggcgttgatacgctgctcggt
cgtcctgttgaaataaaagcggacattgtagttctggccgtcggtatagaggccagccgg
ggcgcggcggcacttgcggaaaaactgcgcatctcctacgacaattacggcttttttatg
gaaagtcacgttaagctcaaaccggtggaaaccaacacagccggagtgtttctggccggc
gtgtgtcagggcgcgaaagacatcccggcctcggtggcccaaggttccgcaacagcagcc
aaagtgcttgccctctttgcacgcgaccgtctggagaatgacccgcagacagcccaggtt
gacacacgccgttgcgtcggatgcggcaagtgcattcgctgctgccccttcggcgccctc
aaggaaacgaccatacggggagagatcaaaacggatgtcattgaaactgtctgccaaggc
tgtggtctgtgcacatcaacctgtccccaaggcgctgtgcagctttcacatgccactgac
aaccagattcttgcggaggtgaacgcgctatgccggtgctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (4)   
   KEGG MODULE (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (8)   
   KEGG ENZYME (4)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (29)   
   Pfam (29)   
All databases (63)   

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