KEGG   Delftia tsuruhatensis: BI380_21360
Entry
BI380_21360       CDS       T04496                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
dts  Delftia tsuruhatensis
Pathway
dts02020  Two-component system
dts02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:dts00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BI380_21360
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BI380_21360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dts03021]
    BI380_21360
Transcription machinery [BR:dts03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BI380_21360
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38
Other DBs
NCBI-ProteinID: AOV03716
UniProt: A0A1D8J4Q6
Position
complement(4607215..4608831)
AA seq 538 aa
MKPGLSLRVSQHLSLTPQLQQSIQLLQLSTLELAQEVEQMLGDNPFLELANDDGDHEAAS
SAPEPAAPGADAADSFQESRADQPSAAVEWEAPSDTSSGDAAETSGTAESLSWEGDGQTN
SGNDDRDWGSDAPSSRTRGQGDDDETDATELARSAESLTDHLHRQALSLRLGEVDRAALR
FLIENLNDDGYLEDPLDELAQGLAGDDLEECEELVHRFTVALRLLQSLEPVGVGARDLAE
CLTLQLRDQLADAEREGDGSAEDEDRQAVLRTALDICAQPMDLLARRDLRKLASLCGARE
ERLREAMVLIARLEPRPGRRFADVQRQIVVPDVIVRPVRMGAGRMEFSVQLNPDVMPKLR
VHDIYASALRSHRGSEGHAALQQRLQEARWFIKNIQQRFDTILRVSQAIVERQKNFFVHG
ELAMRPLVLRDIADALGLHESTISRVTTAKYMATPQGTYELKYFFGSGLGTEAGGNASST
AVRALIKQFVAAEDPRKPLSDNQLADMLKEQGIECARRTVAKYRELLKIPPTTLRKAL
NT seq 1617 nt   +upstreamnt  +downstreamnt
ttgaagcccggactgtcgctgcgcgtctcccagcatctttcgctcaccccgcaactgcag
cagtcgatacagctgctgcagctgtccacgctggagctggcgcaggaagtggagcagatg
ctgggcgacaaccccttcttggagctggcgaacgacgacggcgaccacgaagcggcaagc
agcgccccggagcctgcggcgcccggcgccgacgccgcggactccttccaggaaagccgt
gcggaccagccatcggctgcggtggaatgggaggcgccgtcggacacatcctccggcgat
gccgccgagacctctggcacggccgagtccctgagctgggaaggcgatggccagaccaac
tcgggcaacgacgaccgcgactggggcagcgatgcgccttccagccgcacgcgcggccag
ggtgacgatgacgagaccgatgccaccgagctggcacgcagcgcagaaagcctgaccgac
catctgcaccgccaggccctgagcctgcgcctgggcgaggtggatcgtgccgcgctgcgc
tttctgatcgagaacctcaacgacgacggctacctggaagacccgctcgacgagctggca
cagggcctggcgggcgacgacctggaggagtgcgaggaactggtgcaccgcttcaccgtg
gcgttgcgcctgttgcaaagcctggagccggtgggcgtgggcgcgcgcgacctggccgaa
tgcctgacgctgcagctgcgcgaccagctggccgatgccgagcgcgaaggcgacggcagt
gccgaggacgaagatcggcaggccgtgctgcgcaccgcgctggacatctgcgcccagccc
atggacctgctggcgcggcgtgacctgcgcaagctcgccagcctgtgcggcgcgcgcgag
gagcggctgcgcgaggcgatggtcctgatcgcccggctggagccgcgcccgggccggcgc
ttcgccgacgtgcagcgccagatcgtcgtgcccgatgtcatcgtgcgcccggtgcgcatg
ggtgcgggacgcatggagttcagcgtgcaactcaaccccgatgtcatgcccaagctgcgc
gtgcacgacatctatgccagcgcgctgcgcagccaccggggcagcgaaggccatgcggcg
ttgcagcagcggctgcaggaggcgcgctggttcatcaagaacatccagcagcgcttcgac
accatcctgcgcgtgtcgcaggccatcgtggagcgccagaagaacttcttcgtgcatggc
gagctggccatgcgcccgctggtgctgcgcgacattgccgatgcgctgggcctgcatgaa
tccaccatcagccgcgtgaccacggccaagtacatggccacgccgcagggcacctacgaa
ctcaagtatttcttcggctcgggcctgggcaccgaggcgggcggcaacgcgtcgagcacg
gccgtgcgcgcgctcatcaagcagttcgtcgcagccgaggaccccaggaagccgctgtcg
gacaaccagctcgccgacatgctcaaggagcagggcatcgaatgcgcgcggcgcacggtg
gccaagtaccgcgagctgctcaagatcccgccgaccacgctgcgcaaggcgctgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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