KEGG   Dyella thiooxydans: ATSB10_03190
Entry
ATSB10_03190      CDS       T04308                                 
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
dtx  Dyella thiooxydans
Brite
KEGG Orthology (KO) [BR:dtx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dtx03009]
    ATSB10_03190
Enzymes [BR:dtx01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     ATSB10_03190
Ribosome biogenesis [BR:dtx03009]
 Prokaryotic type
  ribosomal protein modification factors
   ATSB10_03190
SSDB
Motif
Pfam: Radical_SAM TRAM_2 UPF0004 TRAM
Other DBs
NCBI-ProteinID: AND67773
UniProt: A0A160MX20
Position
346590..347933
AA seq 447 aa
MSAQSTSQKIGFVSLGCPKALVDSERILTQLKVEGYEIVPSYDAADAVVVNTCGFIDAAV
QESLDAIGEALHENGKVIVTGCLGKREELIREAYPDVLSISGPQDYASVMSAVHTALPPS
RNKFLDLVPDTGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEVLREAERL
VKGGVKELLVISQDTSAYGVDVKYAEHLWRDRNYRTRMTELCEGLSELGVWTRLHYVYPY
PHVDELMPLMAAGKILPYLDIPFQHASPRILKLMKRPGNIDKTLERVKNWRKAVPDLTIR
STFIVGFPGETDAEFEELLDFLREAELDRVGAFTYSPVEGAKANELPDPVSEELKEDRLE
QFMAVQAEISAAKLQRKVGRTIQVLVDEVNEAGAVARSAADAPEIDGTVLIADGQQLKPG
QFVQVVVESASEHDLHARLAQPVLPVV
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgtccgcccagtccacctcccagaagatcggttttgtcagcctcggttgccccaaggcg
ctggtcgattccgaacgcatcctcacccagctcaaggtggagggttacgagatcgtgccc
agctacgacgcggccgacgcggtggtggtgaacacctgcggcttcatcgacgcggcggtg
caggagtcgctggacgcgatcggcgaggcgctgcacgagaacggcaaggtgatcgtcacc
ggctgcctcggcaagcgcgaggagctgatccgcgaggcctacccggacgtgctgtcgatc
agcggtccgcaggactacgccagcgtgatgagcgcggtgcacacggcgctgccgccgtcg
cgcaacaagttcctggatcttgtgcccgacacgggtatcaagctcactccgaagcactac
gcgtacctgaagatttccgagggctgcaaccaccgctgcagcttctgcatcatcccgtcg
atgcgcggcgacctggtctcgcggccggtcgacgaggtgctgcgcgaggccgagcggctg
gtcaagggtggggtgaaggagctgctggtgatctcgcaggacaccagcgcctacggcgtg
gacgtgaagtacgccgagcacctgtggcgcgacaggaactaccgcacgcggatgaccgag
ctctgtgagggcctgtccgagctcggcgtgtggacgcgcctgcactacgtctacccgtac
ccgcacgtggacgagctgatgccgctgatggcggcgggcaagatccttccctacctggac
atcccgttccagcacgccagcccgcgcatcctcaagctgatgaagcgcccgggcaacatc
gacaagacgctggagcgggtgaagaactggcgcaaggcggtgccggacctgacgatccgc
agcaccttcatcgtcggcttccccggcgagaccgacgccgagttcgaggagctgctggac
ttcctgcgcgaggccgagctggatcgcgtcggcgccttcacctactcgccggtggagggt
gccaaggccaacgagctgcccgaccctgtgtccgaggagctgaaggaagatcgcctggag
cagttcatggcggtgcaggcggagatctccgccgccaagctgcagcgcaaggtcggccgc
accatccaggtgctggtcgacgaggtgaacgaggccggtgcggtggcgcgctcggcggcc
gatgcgccggagatcgacggcaccgtgctgatcgccgacggccagcagctcaagcccggc
cagttcgtgcaggtggtggtggagtcggccagcgagcacgacctgcacgcgcgcctggcg
caacccgtgctgccggtggtgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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