KEGG   Dyella thiooxydans: ATSB10_32760
Entry
ATSB10_32760      CDS       T04308                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
dtx  Dyella thiooxydans
Brite
KEGG Orthology (KO) [BR:dtx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dtx03009]
    ATSB10_32760
Enzymes [BR:dtx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     ATSB10_32760
Ribosome biogenesis [BR:dtx03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    ATSB10_32760
SSDB
Motif
Pfam: PseudoU_synth_2 DUF5818
Other DBs
NCBI-ProteinID: AND70730
UniProt: A0A160N498
Position
3562509..3563045
AA seq 178 aa
MLIALNKPYGVLCQFTDADGRATLADYIVQKGVYAAGRLDQDSEGLLLLTDDGTLAHRLT
DPRHKQPKTYLAQVDGAITDEAIAALRRGVMLKDGPTLPAGAEHATEPDWLWPRDPPVRF
RKAIPTSWLRITLHEGRNRQVRRMTAAVGFPTLRLIRERIGRYALDGLAPGETRLLLP
NT seq 537 nt   +upstreamnt  +downstreamnt
gtgctgatcgcgttgaacaagccctatggcgtgctctgccagttcaccgatgcggacggc
cgcgccaccctggccgactacatcgtgcagaaaggggtttacgcggctggccggctcgac
caggacagcgagggcctgctgctgctcaccgacgacggcacgctggcgcaccggctcacc
gacccgaggcacaagcagcccaagacctacctggcgcaggtggatggcgcgatcaccgac
gaggcgatcgccgcgctgcgccggggcgtgatgctgaaggacggcccgaccctgccggcc
ggcgccgaacatgccaccgagccggactggctgtggccgcgcgatccgccggtgcgtttc
cgcaaggcgatccccaccagttggttgcgcatcactctgcacgagggccgcaaccggcag
gtgcgccggatgaccgcggcggtgggctttcccaccctgcggctgatccgcgagcggatc
ggcaggtatgcgctggacggactggcgccgggcgagacccggctgctgctcccctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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