KEGG   Duganella dendranthematis: HH213_09510
Entry
HH213_09510       CDS       T06560                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
dug  Duganella dendranthematis
Pathway
dug03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dug00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HH213_09510
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dug02044]
    HH213_09510
Secretion system [BR:dug02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HH213_09510
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484 Beta_elim_lyase Phage_Mu_Gp45
Other DBs
NCBI-ProteinID: QJD94071
Position
complement(2049146..2051749)
AA seq 867 aa
MTAAKELVTDNRPLRLRLDLPGGFNDDMLLPQRVFGSESICGGIEYRVLCVSANAQLPLK
KMIAVAAQLDFVTDRGDLRSVCGIVTEASSGDSDGGLASYQLVLRDALAILEKRTNTRVF
RNMDEVEIVQRILDEWRQKSPVLGICFNHEKDEAFDLRTYPKREFTMQHNESDAAFIRRL
LKRRGIGWYIRAGEMMHTLVLFNNADSLRQNAAGTIRYHRDAATEERDTITAWSAVRSLQ
PGTVTRHSWDYMNPQGRDFMLVSTNSSNNQGVNGNELAATLDDYQILPPHAGDDNEDLFN
LGQLRMKRHDYESKCFHGEGSVRDLCAGEYFTLAEHPEVDQHDPAERDFIVTDLQVTAQN
NLPKALATRVERLFARSRWMHGASDVQMQRDAADKVASGPLRMHIQFTAVRRGVTIVPAF
DTRVDVPQAQMQSAIVVGPKGEEVHCDQLGRVKIRFPGTRPEDHEEAAGAGASDTTTDSA
WVRVASNWAGNGPGAQQQCGTIGLPRVGSEVLVTFLGGDPDKPVIVAQLYNQGGAPAALS
SAGDLPGNRYLSGIKSREINGGRANQLRLDDTEGQISAQLASDHGASQLNLGWLPQPRAD
GHGEQRGAGAELRSDMSVAVRGQQGVLITAESGDAEKGKHLERSELIRIAEGLQNLVRQL
GERAEQHAGDKAPSKDLFELIEKLKNLDDSGAPIVALSGPAGLICTSARSIAIGAATTVD
IASVTTTSIASGETASIRSVQEMSLFANEGGIRLTAASGKIALNAQDDQLQVLAKKVVEI
ISNTDWITIKAKKGVRINGGGTELELSASGIKGYTAGKHEMYAADHQTFPGQSRNITFDG
DKSPHKVCVPCLLIAADAHSALAKSGS
NT seq 2604 nt   +upstreamnt  +downstreamnt
atgacggcggccaaggagctggtcaccgataaccggccgttgcggctgcggttagaccta
cccggcggattcaatgacgacatgctgctgccgcagcgcgtgtttgggtcggagagcatc
tgcggcgggattgaataccgcgtgctgtgcgtatcggccaatgcgcaactaccgctgaag
aagatgatcgctgtggcggcccaactggatttcgtcaccgatcgcggcgacttgcgcagc
gtgtgcggcatcgtcaccgaagccagttcgggcgacagcgatggcggcctggccagctac
cagctggtgctgcgcgatgcgctggcgatactggaaaagcgcaccaacacccgcgtgttc
cgcaatatggacgaagtagagatcgtccagcgcatcctcgatgaatggcggcagaaaagc
ccagtgctcggtatctgcttcaaccacgagaaggatgaggccttcgacctgcgtacctat
cccaagcgcgaattcaccatgcagcacaacgagtcggatgcggcctttatccgccgcctg
ctcaaacggcgcggcatcggctggtacatccgggccggcgagatgatgcacacgctggtg
ttgttcaacaatgccgacagcctgcgtcagaacgccgccggcaccattcgctaccaccgc
gacgccgctaccgaagaacgcgacaccatcaccgcctggagcgcggtgcgcagcctgcag
cccggcacggtcacgcggcatagctgggattacatgaatccgcagggcagggacttcatg
ctggtgtcgactaacagcagcaacaaccaaggcgtcaacggcaacgagctggccgccacg
ctggacgactatcagatcctgccgccacacgcaggcgacgacaacgaagacttgttcaac
ctcggtcagctgcgcatgaaacggcatgactacgaatccaaatgcttccacggcgaaggc
agcgtgcgggatctgtgcgctggtgaatacttcacgctggccgagcatccggaagtggac
caacacgaccctgcggaacgcgacttcatcgtcaccgatttacaggtgacggcgcagaac
aacctgccgaaagcattagccacgcgtgtggaacgcctgttcgcccgtagccgctggatg
cacggcgccagcgatgtgcaaatgcagcgcgatgcggcggacaaggtggccagcggccct
ctgcgcatgcacatccagttcaccgctgtgcgccgaggcgtgaccatcgtccctgcattc
gacacccgcgtggacgtgccacaagcgcaaatgcaaagtgccatcgtggtcggtccgaaa
ggtgaggaggtccactgcgaccaactaggccgcgtaaaaatccgcttccccggcacccgc
ccagaagaccacgaagaagccgccggtgccggcgcatcagataccaccaccgactccgct
tgggtgcgtgtcgcctctaactgggcaggcaacggtcccggcgcgcagcaacaatgcggc
acgatcggcttgccccgcgttggttcagaagtgttagttaccttcctcggcggtgacccg
gacaagccggtgatcgtcgcccaactctacaaccaaggtggtgccccagctgcactgagt
agtgcaggcgacttaccggggaaccgctacctctctggaatcaagagtcgcgaaattaac
ggtggtcgagcaaaccaattaaggctggatgacactgaaggtcaaatcagcgcgcaactg
gcgagtgaccatggagccagtcaacttaacctgggctggttgccccagcctagggcagac
gggcacggtgagcagcgaggagcaggcgctgaactgcgcagtgacatgagtgtcgctgtg
cgcgggcagcagggcgtcttgatcaccgcagagtctggtgatgccgagaaaggaaaacat
ctggaacggtctgagctgattcgcattgcagaaggcctacaaaatttagtcaggcaacta
ggcgagcgggcggagcaacatgccggcgacaaggccccgagcaaagatctttttgagctg
attgaaaagcttaaaaacctcgatgatagtggcgctcccattgttgcgcttagtggtcct
gcgggtttaatttgcacgagtgcccgtagtatcgccatcggagccgcgacaacggtagac
atagctagcgttaccaccacatctattgcatcaggcgaaacagcgtcaatacgctcggtg
caggagatgagcctgtttgcgaatgagggcggtatcagattgactgcagccagtggcaag
atagcattgaacgctcaggacgatcaattacaggtgctggcaaaaaaagtggtagagatc
atcagtaacaccgactggattaccatcaaagcgaagaagggagtacgcatcaatggcggt
ggtactgaattagagcttagcgctagcggcatcaagggctacaccgcagggaaacatgaa
atgtacgccgcagatcatcagaccttccccggtcaaagccgcaacatcacatttgatggc
gacaagtcgccacacaaagtctgcgtgccatgcttgttaattgccgccgatgctcatagc
gcattagctaaatctgggagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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