KEGG T05963: FDZ78

Duncaniella sp. B8: FDZ78_01195

Entry

FDZ78_01195       CDS       T05963

Name

(GenBank) deoxyribonuclease IV

K01151

deoxyribonuclease IV [EC:3.1.21.2]

Organism

dun Duncaniella sp. B8

Pathway

dun03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:dun00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FDZ78_01195
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dun03400]
    FDZ78_01195
Enzymes [BR:dun01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     FDZ78_01195
DNA repair and recombination proteins [BR:dun03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     FDZ78_01195

SSDB

Motif

Pfam:

AP_endonuc_2

Other DBs

NCBI-ProteinID:

QCP71281

Position

255576..256430

AA seq 284 aa
MKYIGAHVSAGDGVSNTPLNAHLIGAKSFALFTRNPSRWTSKPIPQAQAEAFRENCMRYG
YSPAHILPHDSFLINLGSPDAVKLEKSREAFLDELRRCEQLGLTMLNFHPGSHMREMETD
ACLDLIADSLNGLLEKTAGVKAVIENTAGQGSNLGYSFDQIARIIDRVDDKTRIGVCIDT
CHAYTAGYDLATAEGYDKTWAEFDSIIGFSYLCGMHLNDTQKGLGSHVDRHAPIATANLD
REFWSRLMNDPRFDDIPLILETPDEAIWAEEISLLYSLDSRKSD

NT seq 855 nt +upstreamnt +downstreamnt
atgaaatatataggagcacatgtctctgccggagacggtgtgagcaatactcctttgaac
gcccatctgataggagcgaaatcatttgctctcttcacccgcaacccgtcgcgctggact
tcgaaaccgataccgcaggcgcaggctgaggcgttcagggaaaactgtatgcgctacggt
tacagcccggcgcatatccttccgcatgacagctttctgatcaatctcggctcgccggat
gccgtgaaactcgaaaagtcgcgtgaggcttttcttgatgaactgcgccgctgcgagcaa
cttggacttaccatgctcaactttcatcctggttcccacatgcgtgagatggagactgat
gcctgtcttgacctgatagccgactcgctcaacggtttgctggaaaagacggcgggggtg
aaggctgtgatcgagaatactgccgggcagggaagtaacctcggatattcgttcgaccag
attgccagaattattgaccgcgtggatgacaagacgagaataggtgtctgcattgacacc
tgccatgcttacacggccggctatgatcttgccacagccgaaggctatgacaagacttgg
gccgaatttgacagcatcatcggtttcagctatctctgcggaatgcatctcaacgatact
cagaagggactcggctcgcatgttgaccgtcatgcaccgatcgcaaccgccaatcttgac
cgcgaattctggtcgagactgatgaacgatccgcgcttcgatgatatcccgctgatactt
gagacccctgacgaggcaatatgggcagaggaaatcagtctactttactcgcttgacagc
cgtaaatcagactga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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