KEGG   Dermabacter vaginalis: DAD186_00120
Entry
DAD186_00120      CDS       T04434                                 
Name
(GenBank) restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
dva  Dermabacter vaginalis
Brite
KEGG Orthology (KO) [BR:dva00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dva02048]
    DAD186_00120
Enzymes [BR:dva01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     DAD186_00120
Prokaryotic defense system [BR:dva02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   DAD186_00120
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DUF4145 DEAD HSDR_N Helicase_C HSDR_N_2 HerA_C DUF6315 TrwB_AAD_bind FlxA Apc5_N AAA_30
Other DBs
NCBI-ProteinID: ANP26573
UniProt: A0A1B0ZF64
Position
22085..25447
AA seq 1120 aa
MGNFDFLRAEWPQIHESCAKAESYVTNDPSTACILARRSIEVLVMHLYRLLDLPEPYKRD
LAAHIADPRFKRITGDGITTKLMLIKNVGNKAVHSPQPIPAGAALQVMRELYLVMVWAAF
RYSASPDAVPMGQQFDPKLAAQAAPLSRADVVKLAEKFREQDEAHARALEERDSLIAELD
AEIEKMRAEVRAAQAEKTRSDTQDYREDETRDQFIDLLLNEAGWPLDKQRDREYPVTGMP
SATGKGYVDYVLWGSDGLPLAVVEAKRTRRSPLEGQEQARLYADALEREFGRRPIIYYTN
GYTHEIWDDASGYPPRAVQGFATAEQLELLIQRRLTRRPLATEPVDPEIAGRYYQVRAIS
AIGNAFDSKQRHALLVMATGTGKTRTSVALVKQLMNAGWVKNVLFLADRTALVDQAHKAF
LAHYPESGPVNLLKDPDKSGRVSFCTYQTMLGLIQKVDGEQRLFGPGHFDLVIIDEAHRS
VYAKYGYIFEYFDSLLLGLTATPKDEVDHNTYRLFQLEDGVPTDAYSLDQGITDGYLVPP
KGVSVGTTFLRRGIRYSDLSESEKDDWDMMDWGEDGPPDSIEADEINRFLFNEDTVDKVL
ALLMESGHKVAGGDRLAKTIIFAKNQRHADFIAQRFDAGWPHLAGEFARVITHGVSYASS
LIESFENADSAPHIAISVDMLDTGIDVPEVANLVFFKPVRSKTKFWQMIGRGTRLCPGLY
GEGEDKKDFYVFDFCGNLEFFSQNLPTVEGSLQKSLTQRIFEHRVALVRGIDMSNGDPDL
RRDTAQLLHEFVTGMTLDNVLVRPHRRLVEKFSDGNAWDDLSAEDAHDVLTLGGLPSKAN
VGPEPAKRFDLLILRAQVALLDGDTAGVDRIRETVQAIATDLLGRTSIPLVVARADLLED
VAGDDWWVDVTLPMLELARVRLRDLAGFVVSDGGRNPVYTDFEDTLTDAVDIDLPGTTPG
MNWDRFRDKTRAYLREHSDHLAIQKLRRNKQLTETDLGEFEKMLQQLGAERTHIDRAVHE
SGSLGLFLRSLSGLDRAAAVEAFAQFLDESTHTVEQIRFVDMIVSELTVNGIMEPSRIFE
SPYTDDFQPVDTLFPETDVESIVTSLRVIRANADPEQKRA
NT seq 3363 nt   +upstreamnt  +downstreamnt
atgggcaacttcgacttcttgcgggctgagtggccgcagattcatgagagctgcgcgaag
gcggagtcgtatgtgacgaacgatccgtcgacggcgtgcattctcgcccgcaggtcgatc
gaagtgctcgtgatgcacctgtaccgcttgctcgatctgccggagccatacaagcgcgac
cttgcggcgcatatcgcggatcctcgcttcaagcggatcacgggagatggcatcaccacg
aaactgatgctcatcaaaaacgtgggcaacaaggccgtgcactccccgcagccaattccc
gcgggtgccgccctgcaggtcatgagggagctctacctcgtcatggtgtgggccgcgttt
cgctactcggcctcgcccgatgccgtgccgatgggacagcagttcgacccgaagctcgct
gcgcaggctgcgccgctgtcccgcgcggacgtcgtgaaactcgccgaaaagttcagggaa
caagacgaagcgcacgcacgcgcactcgaagagcgcgacagcctcatcgcagaactcgac
gcggaaatcgagaagatgcgcgccgaagtccgggccgcgcaagcagaaaaaacccgcagc
gacacccaggactaccgggaagacgaaacccgcgaccagttcatcgacctgctgctcaac
gaagccggatggccgctcgacaagcagcgcgaccgcgaataccccgtcacgggaatgccg
agcgcaaccggcaaggggtacgtggactacgtgctgtgggggtccgacggtctcccgctt
gccgtcgtcgaagcaaaacgcacgcgccgctcacccctcgaaggccaagaacaagcccgc
ctatatgccgacgccctcgaacgagaattcgggcgaaggcccatcatctactacaccaac
ggctacacgcacgagatctgggacgatgcctcgggctacccgccgcgtgccgtgcaaggg
ttcgcgaccgctgaacagcttgagcttctcatccagcgccgcttgacccgccgcccgctc
gccactgaacccgtggatcccgagatcgcgggccgttactaccaagtgcgtgccatcagc
gccataggtaacgcgttcgacagcaagcagcgccacgccctgctcgtcatggcgaccggc
acgggcaagacccgtacgtccgtggccctcgtcaaacagctcatgaacgctgggtgggtg
aaaaacgtgctgttcctcgccgaccgcacggctctcgtggaccaggcgcataaggcgttt
cttgcgcactatcccgaatcggggcccgtcaacctcctgaaggaccccgataagtcgggc
cgagtgtctttctgcacgtaccagacgatgctcgggctgattcaaaaagtcgacggcgag
cagcgactctttggccccgggcacttcgacctcgtgatcatcgacgaggcccaccgcagc
gtgtatgcgaaatacggctacatcttcgaatacttcgattcgcttctgcttggccttacc
gcgaccccgaaagacgaggtcgaccacaacacctaccggctgttccagctcgaagacggt
gttcccaccgacgcctactccctcgaccagggcatcacagacgggtacctcgtgccgccg
aagggtgtgtccgtggggacgacgttcttgcgccgcggcatccgctatagcgatctcagt
gaaagcgaaaaagacgactgggacatgatggactggggcgaagacgggccgcctgacagc
atcgaggccgatgaaatcaaccgcttcctcttcaacgaggacacggtggataaggttctc
gcgctcctcatggaatccggccacaaggttgccggaggagaccgcctcgctaaaaccatc
atcttcgcgaagaaccagcgccacgccgatttcattgcccagcgattcgatgctggctgg
ccgcatctcgcgggggagtttgcgcgcgtcatcacgcacggcgtttcctacgcgagctcg
cttatcgaaagtttcgagaacgcggattccgctccgcatatcgcgatcagcgtggacatg
ctcgacaccggcatcgacgttcccgaagtggcgaacctcgtgtttttcaaacccgtgcgc
tcgaaaacaaaattctggcagatgatcggccgcggcacccgcctgtgccccggcctctac
ggcgaaggtgaagacaagaaagacttctacgtcttcgacttctgcggcaacctcgaattc
ttcagccagaacctccctaccgtcgaaggttctcttcaaaagtcgctcacccagcgcatt
ttcgagcaccgcgtggcgctcgtgcgcggcattgacatgtcgaacggcgaccccgatctt
cgccgcgacaccgcccagctcctccacgagttcgtcaccgggatgactctcgacaacgtg
ctcgtgcgcccacatcgtcggctcgtggaaaaatttagcgacggcaatgcgtgggacgat
ctcagtgccgaagacgcccacgacgtgctcacacttggcggcttgccgagcaaagcaaac
gtcggacccgagcccgccaaacgctttgacctgctgatcctgcgtgcccaagtggccctt
ctggacggtgacaccgctggtgttgaccgcattcgcgaaaccgtgcaggccatcgcgacg
gacctgctaggccgcaccagcatccccctcgtcgtcgcccgcgccgatctgctcgaggac
gtcgccggagacgactggtgggtggacgtcaccctgccaatgctcgaactcgcccgcgtg
cgcctgcgcgacctcgcggggtttgtggtgtccgacggcggccgcaacccggtgtacacc
gactttgaagacaccctcaccgatgccgtcgacatcgatcttcccggcacaacgcccggc
atgaactgggatagattccgcgacaaaaccagggcctacctgcgcgaacacagcgaccac
ctcgcgatccaaaagctccgccgcaacaagcaactcaccgagaccgaccttggtgagttc
gagaaaatgctccaacaactcggggcagaacgaacccacatcgacagggccgttcacgaa
agcggaagcctcggcctgttcctccgctccctatcgggactcgatcgtgccgcagcggtt
gaagccttcgcacagttcctcgacgagtccacgcacaccgtcgagcagattcgcttcgtc
gacatgatcgtttccgaactcaccgtgaacggcatcatggagccgagccgaatcttcgaa
tccccgtacacggacgacttccaacccgtcgatactctcttccctgaaacggacgtcgag
agcatcgtgacgagcctccgagtgatccgcgcgaacgctgatcctgaacagaaacgcgcc
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system