KEGG   Nitratidesulfovibrio vulgaris DP4: Dvul_0011
Entry
Dvul_0011         CDS       T00452                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
dvl  Nitratidesulfovibrio vulgaris DP4
Brite
KEGG Orthology (KO) [BR:dvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dvl03032]
    Dvul_0011
   03400 DNA repair and recombination proteins [BR:dvl03400]
    Dvul_0011
Enzymes [BR:dvl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Dvul_0011
DNA replication proteins [BR:dvl03032]
 Prokaryotic type
  DNA Topoisomerases
   Dvul_0011
DNA repair and recombination proteins [BR:dvl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Dvul_0011
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim DNA_ligase_ZBD zf-ribbon_3 Lar_restr_allev Flavodoxin_1 HMBD
Other DBs
NCBI-ProteinID: ABM27035
UniProt: A0A0H3A6E4
Position
complement(16232..18514)
AA seq 760 aa
MGKDLIIVESPAKVKTIKKFLGGKYVVQASVGHVRDLPTNEIGVDEANNFAPQYRVIDGK
QKVVDTLREAAAKADTVYLAPDPDREGEAIAWHVAALIEGKADNIKRIQFNEITARAVRE
ALENPRDLNRALFDAQQARRVLDRLVGYKLSPLLWKKVKRGISAGRVQSVALRLIVDRES
ERRAFTPEEYWLFRAMFAKNVPGATPTSPDPQYAPFKAELAKIDGKKAHVADADAANALE
DAMRGKPFVITAVERKKRERQPQPPFITSTLQQAANQRLGYSAKRTMNIAQRLYEGVELG
EMGTVALITYMRTDSVRVSDEARDAARAFVTETWGADFCPAKPRQFKTKGSAQDAHEAVR
PVDVNVTPDSVKHLLPPDQFQLYRLVWSRFVASQMAPARFDDTTVAIACGPAEWRAKGER
MLFPGFLAAMPQKEEGDAELPPLQEGETLHPVSVEKEQKFTQPPARYTEASLVRELEERG
IGRPSTYASIISTLIDRDYTRLEDKHFVPTDLGATVCDLLARHFTTLMDVGFTAQMEDSL
DKVAEGGLDWVELLSRFSADFNPTLESAAKAMETVKGGLPTNVTCPECGKPVVVKFGKAG
PFLACTAYPDCKFTSNFSRDEKGDIVIEQRAREELEAVGTCPECGKDLVVKKARTGSRFI
ACTGYPDCRHTEPFSTGIACPREGCDGQLVEKSSKRGKIFYSCNRFPKCDYALWDWPVPG
PCPVCGSPLLVKKSTRAKGLHIACPEKTCRYTQELPDDEG
NT seq 2283 nt   +upstreamnt  +downstreamnt
atgggcaaggacctcatcatcgtcgaatctcccgccaaggtgaagaccatcaagaaattc
cttggcggcaagtatgtcgtgcaggcgagcgtcggtcacgtccgcgacctgcccaccaac
gagatcggcgtggacgaggccaacaacttcgctccgcagtaccgggtcatcgacggcaag
cagaaggtcgtcgacacgcttcgcgaagcggctgcgaaggcagacaccgtctacctcgca
cccgacccggaccgtgaaggtgaagccatcgcgtggcatgtggccgcgctcatcgaaggc
aaggcagacaacatcaagcgcatccagttcaacgagatcaccgcacgggccgtgcgcgag
gcgctggagaacccgcgcgacctcaaccgcgccctgttcgacgcccagcaggcgcgccgc
gttctcgacaggctggtgggctacaaactttcgccgctgttgtggaagaaggtcaagcgc
ggcatatcggcggggcgtgtgcagtcggtggcgttgcgtctcatcgtcgaccgcgagagt
gaacgccgcgccttcacacctgaggaatactggctgttccgcgccatgttcgccaagaac
gtgcccggtgcaacgcccacaagccccgacccgcaatacgcccccttcaaggccgaactc
gcgaagatagacggcaagaaggcccatgtagccgacgccgacgccgccaacgcccttgaa
gacgccatgcgcggcaagcccttcgtcatcaccgccgtcgaacgcaagaagcgcgaacgc
cagccgcagcccccgttcatcacctccaccttgcagcaggccgccaaccagcgactgggc
tattccgccaagcgcaccatgaacatcgcgcagcggctgtatgaaggtgttgaactgggc
gagatgggtacggtggccctcatcacctatatgcgtaccgactcggtgcgtgtctccgac
gaggcacgcgacgccgcacgcgccttcgttaccgagacgtggggtgccgacttctgcccg
gccaagccccggcagttcaagaccaagggcagcgcgcaggacgcccacgaagcggtgcgt
cccgtcgatgtcaacgtgactcccgacagcgtgaagcacctgcttccccccgaccagttc
cagctttacagactggtgtggtcgcgtttcgtggcctcgcagatggccccggcacgcttc
gacgacaccaccgttgccatcgcatgcggccccgccgaatggcgcgccaagggcgaacgg
atgctctttcccggttttctcgcggccatgccgcagaaggaggagggcgatgctgaactg
ccgccactgcaggagggcgagaccctgcaccccgtctccgtcgagaaggaacagaagttc
acgcaacctccggcgcgctacaccgaagcatctctggtgcgtgaactcgaagagcgcggc
ataggccgtccgtcgacctacgcctccatcatctccacgctcatcgaccgcgactacacg
cgcctcgaggacaagcacttcgtgcccaccgacctcggggccacggtgtgcgacctgctg
gcgcgccacttcaccaccctcatggatgtcgggttcaccgcccagatggaggactcgctc
gacaaggtggcagaagggggactcgactgggtcgaactgctttcacgcttctcggccgac
ttcaaccccacgctggaatccgctgccaaggccatggagacggtgaagggcggtctgccc
acaaacgtcacctgccccgagtgcggcaagcccgtcgtggtgaagttcggcaaggcaggg
cccttcctcgcctgcaccgcctaccccgactgcaagttcaccagtaacttctcccgcgac
gagaagggcgacatcgtcatcgaacagcgggcccgcgaagagcttgaagccgtaggcacc
tgtcccgagtgcggcaaggacctcgtggtcaagaaggcacgtaccggcagccgtttcatc
gcgtgtaccggctaccccgactgtcgccacaccgaacccttctcgacgggcatcgcctgc
ccgcgtgaaggctgcgacggtcaacttgtggagaaaagctcgaagcgcggcaagatattc
tactcgtgcaaccgcttccccaagtgcgactacgcactgtgggactggcccgtacccggc
ccgtgccccgtgtgcgggtcgccgctgctggtgaagaagagcacccgtgccaagggcctg
cacatcgcctgccccgaaaagacctgtcgctacacgcaggaacttcccgacgacgaagga
tag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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