KEGG   Nitratidesulfovibrio vulgaris DP4: Dvul_1739
Entry
Dvul_1739         CDS       T00452                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
dvl  Nitratidesulfovibrio vulgaris DP4
Pathway
dvl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Dvul_1739
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dvl03021]
    Dvul_1739
   03400 DNA repair and recombination proteins [BR:dvl03400]
    Dvul_1739
Enzymes [BR:dvl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Dvul_1739
Transcription machinery [BR:dvl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Dvul_1739
DNA repair and recombination proteins [BR:dvl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Dvul_1739
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RAD51D_N
Other DBs
NCBI-ProteinID: ABM28756
UniProt: A1VE90
Position
complement(2050661..2051704)
AA seq 347 aa
MLIKQGDRLINTRNWSELVKPEQISRDGEVSDTMYGKFVCEPLERGYATTIGNAMRRVLL
SSLQGAAFVAVKISGVQHEFTTIPGVLEDVTDVVLNLKQVRLAMDTEEPQYLELKVDKRG
AITAGDVRTNQHVMVLNPDQHIATLTEDIELTFELEVRMGKGYVPADMHEGLSEEIGLIK
LDASFSPVRKVAYTVEQARVGQMTNYDKLILEVWTDGSVSPEDAIAYSAKIIKDQISVFI
NFDERISGENSNGSADSGEFNEHLFKSIDELELSVRATNCLKSANIALVGELVQKSENEM
LKTKNFGRKSLDEIRRVLGDMGLDFGTKVDGFEKKYQEWKRKQQHEA
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgctcatcaaacaaggcgacaggcttatcaacacgcggaactggtcggaactggtcaag
ccggagcagatctcccgggatggcgaagtctccgacaccatgtacggaaagttcgtctgc
gagcctctggagcgcgggtatgcaacgaccatcggcaatgccatgcgtcgcgtgcttctc
tcttctcttcagggtgctgcgttcgtggcggtcaagatctcgggcgtacagcacgagttc
accaccatccccggcgtgctcgaagacgtgaccgatgtcgtgctgaacctcaagcaggtt
cgtcttgccatggacaccgaagagccccagtatctggagctcaaggtggacaagaggggc
gcgatcaccgctggtgacgtaagaaccaaccagcatgtcatggttctcaaccctgatcag
catatcgcgaccctgaccgaggacatcgagctcaccttcgagctcgaggtccgcatgggc
aagggctacgtgcccgccgatatgcatgaagggctcagcgaggagatcggcctcatcaaa
ctcgacgccagcttctcgcccgtgcgcaaagtcgcctatacggttgagcaggctcgcgtc
ggccagatgacgaactatgacaagctcattctcgaagtctggaccgacggttcagtctct
cccgaggatgcgattgcctacagcgcgaagatcatcaaggaccagatttccgtcttcatc
aacttcgatgagcggatttcgggcgaaaactcgaacgggtctgccgattccggtgaattc
aacgagcatctcttcaagagcatcgatgagctcgaactttccgttcgtgccaccaactgc
ctgaagagcgccaatatcgccctcgtgggtgaactggtccagaagtccgagaacgagatg
ctgaagaccaagaacttcggtcgcaagtcgcttgacgaaatccgtcgggtgcttggtgac
atggggctcgacttcggcaccaaggtcgacggcttcgagaagaaatatcaggaatggaag
aggaagcagcaacatgaggcatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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