KEGG   Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_1402
Entry
DvMF_1402         CDS       T00816                                 
Name
(GenBank) RNA modification enzyme, MiaB family
  KO
K18707  threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
Organism
dvm  Nitratidesulfovibrio vulgaris Miyazaki F
Brite
KEGG Orthology (KO) [BR:dvm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dvm03016]
    DvMF_1402
Enzymes [BR:dvm01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     DvMF_1402
Transfer RNA biogenesis [BR:dvm03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    DvMF_1402
SSDB
Motif
Pfam: Radical_SAM UPF0004 B12-binding
Other DBs
NCBI-ProteinID: ACL08350
UniProt: B8DRR3
Position
complement(1712411..1713799)
AA seq 462 aa
MSGHAFFALTLGCKINQYETEAVREAWLARGWREAADPADADVLLINSCAVTARAVADVR
QAVARMHRAAPHGRIVVTGCAAQVLREDIAALPGVSDVVGQQAKVSLLRYDPEGGAAGAH
EPDGGGDGGDDLAAGDTAFPAFRIDGFTRSRPVLKVQDGCSHRCTYCIVPLARGAARSRD
PREALAEARRLLDAGFRELIVSGVNLRQYGRDLPGGGPDFWDLLAFLERELAPQWAGRAR
LRISSLEPGQLGERALDVLAESRLVAPQLHLSLQSGSPGVLRRMGRGHYRPEPLLDFVRE
LAEVWPLFGLGADILTGFPGEADAEFGETLDFVGALPLTYAHVFPYSRRPGTPAAVMEGQ
LPQEVKKRRAAELRGAVAVKKATFLQRLLDEPRLLVAPEGARGVKGVCEYYAECRFTGGR
RPAAQAGQGGEQAGPGDLVAVRPLAVERDGLIVEAMKEGEGS
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgagcggtcacgcctttttcgcgctgacgctgggctgcaagatcaaccagtacgagacc
gaggccgtgcgcgaggcatggctggcgcgcggctggcgagaggcggcggaccccgccgat
gccgacgtgctgctgatcaactcgtgcgcggtcaccgcgcgcgccgtggccgacgtgcgg
caggccgtggcccgcatgcaccgggccgcgccgcatgggcgcatcgtggtcaccggctgc
gcggcgcaggtgttgcgcgaggacattgccgcgctgcccggcgtttccgatgtggtgggc
cagcaggccaaggtttcgctgctgcgttatgacccggaggggggcgcggcgggggcacat
gaacccgatggagggggcgacggcggcgacgatctcgccgctggtgacaccgcgtttccg
gccttccgcatcgacggcttcacccggtcacgccccgtgctcaaggtgcaggacggctgt
tcgcaccgttgcacctactgcatcgtgccgctggcccgcggcgcggcccgcagccgcgac
ccgcgcgaggcgctggcagaggcgcgccgcctgctggatgcggggtttcgcgaactcatc
gtctccggcgtgaacctgcgccagtacgggcgcgacctgcccggcggcgggccggacttc
tgggatctgctggcctttctggaacgcgagcttgccccgcagtgggcgggccgggcgcgg
ctgcgcatcagttcgctggagccggggcagcttggcgagcgcgcactggacgtgctggcc
gaaagccgtctggtggccccgcagctgcatctttcgttgcagagcggcagccccggcgtg
ctgcgccgcatgggacggggacattaccggcccgagccgctgctggatttcgtgcgcgag
ttggccgaggtgtggccgctgttcggccttggcgcggacatcctgaccggctttcccggc
gaggcggacgccgagtttggcgagacgctggatttcgtgggggcgttaccgctgacctat
gcgcacgtgttcccgtattcgcgcaggccgggcaccccggcggcggtgatggagggacaa
ctgccgcaggaggtgaagaagcgccgggcggcggagttgcgcggcgcggtggcggtgaag
aaggccacgttcctgcaacgcctgctggacgagccgcgcctgctggtagccccggagggt
gcgcgcggcgtgaagggcgtgtgcgagtattatgcggagtgccggttcaccggcgggcgg
cgtccggctgcgcaggcggggcagggcggggagcaggcaggccctggcgatctggtggcc
gtgcgtccgttggctgtcgagcgtgacggtttgatcgtggaggctatgaaggaaggagaa
ggctcgtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

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