KEGG   Desulfosarcina widdelii: DSCW_09850
Entry
DSCW_09850        CDS       T06303                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
dwd  Desulfosarcina widdelii
Pathway
dwd03030  DNA replication
dwd03430  Mismatch repair
dwd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dwd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DSCW_09850
   03430 Mismatch repair
    DSCW_09850
   03440 Homologous recombination
    DSCW_09850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dwd03032]
    DSCW_09850
   03400 DNA repair and recombination proteins [BR:dwd03400]
    DSCW_09850
Enzymes [BR:dwd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DSCW_09850
DNA replication proteins [BR:dwd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DSCW_09850
DNA repair and recombination proteins [BR:dwd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DSCW_09850
SSDB
Motif
Pfam: RNase_T RNase_H_2 PAS_4 DEDDh_C PAS_10 PAS PAS_9 HisKA Mob_synth_C Rv2175c_wHTH PAS_8 OSCP
Other DBs
NCBI-ProteinID: BBO73568
UniProt: A0A5K7YY76
Position
complement(1013744..1015933)
AA seq 729 aa
MKLNNKFWLFAAVCIAFTNAIAVILAVLFWRQISPFERQMLIRLFSEQFWYFFATGVFLF
AAFGFTLDWFFRFYILPLIQMVEETRMMNTVNPAHRLKIDGSREIKELAELINACGDQYE
TAKHVIDQTVESAKAKTEAEKNILATIMAELTQGVLICDTVGRILLYNRQAQRVLDKAQR
PEEDLEAENVEESALPEGFVGLHRSVYSLIDRNLIQYALKEIQRKLDRNKKNVSSHFVVV
TQKRRQLLVETLPILDEDQRFAGFALIFSDITHQLKHTGQLNEHLKNMAKSLRSSIAAIR
STADLMVQFPDMAADQKNDFLGIISEQAEALSRVLRNELTETSIYAKSRWPLAPILVTDF
VAALQDEALLLSDIDLEVAECDSRCMIRVDNYSLMLAIRFVLERLKKEFNQDCSRIRLTA
PGNLVQVDLIWNGPPLKIETLRHWSSLPLTAPQEGLPLTLKEVLEHHHAEIWPHTDSQET
GVGCLRLFIPMVQSERPSEDVRQVAQLLKKRPEFYDFDLFSRTGQAPELEKRLLGELTYT
VFDTETTGLDPRGGDEIISIGAIRVVNGRLLHTETIHQLVDPCRPIPGESIKYHGITDQM
VEGMPTVDKALAFLYRFARDTVLVAHNAAFDMRMLEMKEKATGIRFTNPVLDTMHLSAIV
HPAHEDHSLDTIAQRLGVSLTKRHDALGDAIATGEVFLKIIPLLNEKGIYTLKDALVASQ
RTYYTRLKY
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgaaactgaacaataaattctggctgttcgcagccgtatgcatcgcttttaccaacgcc
attgcggtgatcctggccgttttgttctggcggcagatcagcccctttgaacgacagatg
ctgatccggttgttcagcgagcaattctggtatttctttgccaccggggttttccttttc
gcggccttcggtttcaccctggattggttcttccgtttttacatcctgccattgattcaa
atggtggaagaaacccgcatgatgaataccgtcaacccggcgcatcgtctcaaaatcgac
ggcagccgggagatcaaggaactggccgaactgatcaacgcctgcggcgaccaatatgaa
acggccaagcatgttatcgaccagaccgttgagtccgcaaaggccaagaccgaggcggaa
aaaaacatactggccaccatcatggccgaactcacccagggcgtgttgatctgcgacacc
gtaggtcgcatccttttgtacaaccgacaggcccagcgggtactggacaaagcccagcgg
ccggaagaggaccttgaggcagaaaatgtagaagagtccgctttgcccgaaggtttcgtc
gggctgcatcgctcggtctattcattgatcgacaggaacctgatccagtatgccctcaaa
gagatccagcgaaagctggaccggaacaaaaaaaacgtctcttcccattttgtcgtggtc
acccaaaaaaggcgccagcttctggtcgagacactgccaattttggacgaggatcagcgt
tttgccggatttgccctgattttctcggacatcacccatcaattgaaacataccggccag
ttgaacgaacatttaaaaaacatggccaaatccctgcgctcttccattgcagcgattcgt
tctaccgcggatttgatggtccagttccccgacatggctgcagatcagaaaaacgacttt
ctgggaattatatccgagcaggccgaagcattgagccgcgtgttgcgaaacgaactgacc
gaaacaagcatttatgccaaatcccgatggccgctggctcccattctggtgaccgatttc
gttgcagcccttcaggatgaagcccttttgctatcggatatcgacctggaggtggccgaa
tgcgattcgcgttgcatgatccgggtggacaactactctttgatgctggccattcggttt
gttctcgaacgcctgaaaaaagagttcaaccaggattgcagtcgaattcggttgactgcg
ccgggcaacctggtacaggtcgacctgatctggaacggaccgccattgaaaatcgaaacc
ttgcgccattggagcagtctgccgctgaccgctccgcaggaagggctcccgctgaccttg
aaagaggtgttggaacaccaccatgcagaaatctggccccataccgacagccaggagaca
ggcgtcggctgtctgcggttgttcattcccatggtccaatcggaaagaccgtccgaggat
gtccgtcaggttgcgcagttgctcaagaaacgaccggagttttacgattttgaccttttc
agccgaaccggccaggcaccggagttggaaaaacggcttttgggtgaattgacctacacc
gttttcgatacggaaaccaccggattggacccgcgcggcggggacgagattatctccatt
ggcgccattcgtgtcgtcaacggccgactgttgcacacggaaaccattcatcaattggtg
gacccttgtcggcccatccccggtgaatcgatcaagtatcacgggattaccgatcagatg
gtcgaaggcatgccgaccgtcgacaaagcacttgcatttttgtatcgcttcgcccgggat
acggttctggtcgctcacaatgcggccttcgacatgcgcatgctggaaatgaaagaaaaa
gccaccggaattcgctttaccaatccggttctggacaccatgcatctttccgccatcgtt
catccggcccatgaagaccattccctggacaccatcgcccaacgactgggagtgagcttg
accaaacgacatgacgccctgggggacgccatcgccaccggtgaagtgtttttaaaaatc
atcccgctgctcaatgaaaaggggatctatacgctcaaagatgcgctggtcgcctcccaa
agaacctactatacccggctcaaatactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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