KEGG   Desulfosarcina widdelii: DSCW_33220
Entry
DSCW_33220        CDS       T06303                                 
Name
(GenBank) hypothetical protein
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
dwd  Desulfosarcina widdelii
Pathway
dwd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dwd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    DSCW_33220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dwd03400]
    DSCW_33220
Enzymes [BR:dwd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     DSCW_33220
DNA repair and recombination proteins [BR:dwd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DSCW_33220
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 Viral_helicase1 AAA_11 HHH_5 Helicase_RecD DEAD HHH_2 HHH_8 AAA_22 UvrD-helicase AAA_25 AAA_18 AAA_28 UvrD_C HHH nSTAND3 T2SSE 5_3_exonuc TK Rad17
Other DBs
NCBI-ProteinID: BBO75905
UniProt: A0A5K7Z5C2
Position
complement(3544090..3546636)
AA seq 848 aa
MDSNSKTGKIIEQLRGIVDRVTYHNADNGWSVLRVRPLADPHQQETVTVHQTKVFAGATM
EFHGAWTVHPKFGRQFKAIKAVEKRPATAAALEKYLGSGLIKGVGPKTAKKIVKYFGSDT
LDVFENEIERLTEITGIAQKKLAMIRQAWVEHRAIRNVMMFLQSHGISTLFAVRIYKEYG
DDAIETVNEDPYRLARDFYGIGFFSADKVALSIGLATDSPQRIMAGINHVLAASREFGHC
YLRRSQITAQVNELLGLRLDDRIPDYLGQMQKDGLVMARELPVLDEGVETCYYSRTLYFD
ERYVARRVSDATDSPQVDHERVEDWLNRYCEAKQFRLSDEQLEAIRGIVSEKFSVLTGGP
GCGKTTATLVLVKLLEAMRKKILLAAPTGRAAQRMMDVIGRESKTVHRLLEWQIGNFKRN
EEHPLDVDFIVIDECSMLDISLAASLLKAIPQKSQILFIGDADQLPSVGAGNVLRDIIAS
GVVRCFELKTVFRQARESFIIQYAHQINHGDLPYIDTPFKKPEIWQQKVDCLFMDSDEAT
QEQLNFIARVKRFYDSRAPEQDATADPAENPYEFRIHEVVTPYETELIVPKKFQHVDLRN
VVEAEGDVEELLSVLKKVHPWSSLHYGLSASEVVRKLYLEWIPKYFGENTEIQILSPMTR
GSLGTVNLNRTIQESANPARTGKHELTVGERVFRVGDRVIHRRNNYDLNVFNGDIGNIRD
IDTENLTLSVSFYPDGRVVEYSRDAIPELDLAYAITIHKSQGSEFEVVILPVLTQHFKML
FRNLLYTGLTRARRLAVLVGTRKAMAMAVRNRDTSRRQTALRELLVGLRSEDRGQRTEDG
RWRSDDED
NT seq 2547 nt   +upstreamnt  +downstreamnt
atggattccaattcgaaaaccgggaaaattatagaacagctgaggggcattgtggaccgg
gtcacctatcacaatgccgacaacggctggtcggtcctgcgtgtgcggccactggccgac
ccccaccagcaggagaccgttacggttcaccaaacaaaggtctttgccggagccaccatg
gaattccatggcgcgtggaccgtgcacccgaagttcggccgccagttcaaggccatcaag
gccgttgaaaaaagacccgccactgccgcagcattggagaaataccttggctccggactt
attaaaggggtcggtccgaagacggcaaagaaaatcgtaaaatatttcggcagcgacacg
ctcgacgtgtttgaaaacgagatcgaacgcctcaccgagattaccgggattgcccaaaaa
aaactggcgatgatcagacaggcttgggttgagcaccgggccatccgaaatgtgatgatg
tttctgcagtcccacggcatcagcacgcttttcgctgtgaggatctacaaggaatacggt
gacgatgccattgaaaccgtcaacgaggacccctaccggctggcccgggatttttatggc
atcggcttcttttcggcggacaaggtcgccttgagtatcggtcttgcaaccgacagcccc
caaagaatcatggccggcatcaatcacgtcctggccgccagcagggagttcggccattgc
tatctgaggcggtcgcaaattaccgctcaagtgaatgagctgctcgggttgcggcttgac
gatcggatacccgactacctcggccagatgcagaaagacggccttgtcatggcccgtgaa
ttgcccgttttggatgaaggcgtcgaaacctgctattattccagaaccctttatttcgac
gaacggtacgtcgccagaagggtttccgatgcgaccgattcgccgcaggtagatcatgag
cgcgtcgaagactggctcaaccggtactgcgaagcaaaacaatttcgcttgagtgatgag
cagttggaagccatcaggggcatcgtatccgagaaattttccgtgctgaccggcggtccc
ggatgcgggaaaacgacggcaaccctggtcctcgtcaaattgctcgaggcgatgcgcaag
aaaatcctgcttgccgccccgacaggccgggcggcgcaacgaatgatggatgtcatcggg
agagagtcgaaaaccgtccatcgattgctggagtggcagatcggcaatttcaaaaggaac
gaggagcatccgctcgatgtggattttatcgtcatcgacgaatgctccatgctggacatc
agcctcgccgcatccctgctgaaagccattccgcagaagagccagatcctttttatcggt
gacgccgaccagcttccatcggtcggagccggcaacgtccttcgcgatattattgcctcc
ggagttgttcgctgcttcgaactcaaaaccgttttccggcaggcccgggaatctttcatc
atccaatatgcccaccagatcaaccacggcgatctgccttacatcgatacgccctttaaa
aagcccgagatctggcagcaaaaagtggactgcctgttcatggactcggacgaggccacg
caggagcagctcaatttcatcgctcgggtcaagcgattctacgattctcgggctccggaa
caggacgccacggcagacccggccgaaaacccttacgagttcagaattcatgaggtggtc
accccttacgagacggaactgatcgtcccgaaaaaattccagcatgtggacctgagaaac
gtcgtcgaggccgaaggcgatgtcgaggaactgttgtccgttctgaaaaaggttcacccc
tggtcgtcgctgcattacggcctgtcggcatccgaagtggtgcggaagctctatctggaa
tggatccccaaatatttcggggaaaataccgagatccagattctctcgcccatgacccgg
ggcagcctgggtacagtcaatctgaaccggaccatccaggaatcggccaatcccgcccgg
acgggcaaacacgaactgacggtaggcgagcgggttttcagggtcggcgaccgggtgatt
caccgccggaacaattatgacctgaacgtattcaacggcgatatcgggaatattcgcgat
atcgataccgagaacctgacactgtcggtctccttttacccggatggccgggtcgtggaa
tacagccgcgacgccatccccgagttggatctggcctacgccattaccatccataagtcc
cagggcagcgaattcgaggtggtgatactgccggtgctgacccagcatttcaaaatgctt
ttcagaaacctgctttatactggcttgacgcgcgcccgccggctggccgtgttggtgggc
acccgcaaggccatggccatggcggtgcgcaaccgtgacacgagccgacggcagactgcg
cttcgggagttgctggtgggactgaggtcggaggacagaggacagaggacggaagatgga
agatggaggtcggatgatgaagattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (33)   

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