KEGG   Desulfosarcina widdelii: DSCW_65750
Entry
DSCW_65750        CDS       T06303                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
dwd  Desulfosarcina widdelii
Pathway
dwd03030  DNA replication
dwd03430  Mismatch repair
dwd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dwd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DSCW_65750 (dnaX)
   03430 Mismatch repair
    DSCW_65750 (dnaX)
   03440 Homologous recombination
    DSCW_65750 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dwd03032]
    DSCW_65750 (dnaX)
   03400 DNA repair and recombination proteins [BR:dwd03400]
    DSCW_65750 (dnaX)
Enzymes [BR:dwd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DSCW_65750 (dnaX)
DNA replication proteins [BR:dwd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DSCW_65750 (dnaX)
DNA repair and recombination proteins [BR:dwd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DSCW_65750 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA RuvB_N AAA_5 AAA_30 TIP49 AAA_19 AAA_22 AAA_16 Mg_chelatase PIF1 nSTAND3 AAA_18 AAA_14 AAA_7 Rad17 TsaE T2SSE DUF815 AAA_28 Sigma54_activat DUF3646 ABC_tran RNA_helicase TniB AAA_2 AAA_24 DNA_pol3_delta_C zf_C2H2_13 Zeta_toxin SKI Torsin
Other DBs
NCBI-ProteinID: BBO79158
UniProt: A0A5K7ZDD9
Position
7123880..7125565
AA seq 561 aa
MAYLVLARKYRPQTFDEVVGQAHVTRTLKNAIEKGRVAHAMLFSGPRGTGKTTIARILAK
AMNCESGATATPCNVCRSCSDITAGRGVDVFEIDGASNNSVDQIRELRENSRYMPAHSRY
KIYIIDEVHMLSIAAFNALLKTLEEPPEHVLFFFATTEAHKIPVTILSRCQRHDLKRIDL
DAVVDHLETICRQESVSVAADNLWVVARESGGSMRDALSLLDQILACGESRMDEGYVMRL
LGSMDRQVLFDLSDAVFARDISRVLGAIDTVYKSGQDLKRFYADLLAHFRHLMLIKMGAR
PELLDDLAAGEIETLARQVKAVSTVFIDQVFTILFNAEAGIRYATSPRLALETAFFKIHQ
IQPALPIDLLIERLDDLLKQAPAVAASGIVESQSAYGQADAAAKVALPGPSAKTDLPAVE
KPLSYAPEKSGAAADPGGSKDVQELWHRAVAVIGESKPSIAAALGRAQLGDVSDQEFTVV
LHENGYTANLVKKNLAMVESVCREQTGRKVHIDLSDNAADEKNNVAEKQKADEIRQTLLN
HPLVADAVEIFNGKIEEIKIG
NT seq 1686 nt   +upstreamnt  +downstreamnt
atggcttatctggtattagcgcgcaaatacaggccccagacattcgacgaagtggtcggt
caggcgcatgtcacccggacactgaaaaacgccatcgagaaggggcgcgtagcccacgcc
atgcttttctccggaccgcggggaaccggtaaaaccaccatcgcccgcatcctggccaag
gccatgaactgcgaatccggcgccaccgcaacgccctgcaacgtctgccgatcctgcagc
gacatcaccgccggacgcggtgtggacgtattcgaaatcgacggcgcctccaacaacagc
gtcgaccagattcgggaactgcgggagaacagccgctacatgccggcccacagccgatac
aagatctacattatcgacgaagttcacatgttgagcatcgctgctttcaacgccctgctc
aagactctggaagaaccgccggaacatgtcctgtttttctttgccacgacggaagcccat
aaaatcccagttaccatcctgtcccgctgccagcggcacgatctgaagcgaatcgatctc
gatgcggtggtcgaccacctggaaacgatctgtcgacaggaatcggtatccgttgcagcg
gacaacctgtgggtcgtcgcccgggaatccggcggcagcatgcgagacgccctgagcctt
ctggatcagatcctggcctgtggcgaaagccgtatggacgaagggtatgtcatgcgcctt
ctgggcagcatggaccgtcaggtactgttcgatctttccgacgcggtgtttgcccgggat
atttcccgggtgctgggcgccatcgatacggtttataagagtggccaggatttgaagcgt
ttttatgccgatctgctggcccattttcgccatttaatgttgattaaaatgggtgcccga
ccggaattgctggacgatctggctgccggagaaatcgaaactctggcccgtcaggtcaaa
gcggtttccactgtttttatcgatcaggtttttacgatattgttcaacgccgaagccggc
atccgttatgccacctcgcccaggctggccttggaaaccgcgtttttcaagattcaccag
atccagccggcgctgcccatcgacctgctgatcgaacgtctggacgatcttttgaagcag
gcgcctgccgtcgccgcgtcgggaattgtcgaatcccaatccgcttacggccaggccgat
gcggcggcaaaggtagcgttgcccggcccttcggcaaaaacggatttgccggcagtggaa
aagccgctatcttatgcgcctgaaaaaagtggtgccgcggccgatccggggggctccaaa
gatgttcaggaactctggcatcgcgccgttgccgtgatcggggaaagcaagccctccatt
gcagcggcgcttggccgggcgcagcttggcgatgtgtccgaccaggagtttacggtagtc
ctgcacgaaaacgggtatacggccaacctggtgaagaaaaatctggccatggtcgagtcc
gtatgtcgcgaacagaccgggcgcaaggtccatatcgatttatcggacaatgcggccgat
gagaaaaacaacgttgcggaaaaacaaaaggccgatgaaattcggcaaacgctgctcaac
catccgttggtggccgatgccgtggaaattttcaacgggaaaatcgaagagattaaaatc
ggatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (33)   
   Pfam (33)   
All databases (45)   

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