KEGG   Drosophila willistoni: 6640560
Entry
6640560           CDS       T01067                                 
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
dwi  Drosophila willistoni
Pathway
dwi03022  Basal transcription factors
dwi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dwi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    6640560
  09124 Replication and repair
   03420 Nucleotide excision repair
    6640560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dwi03021]
    6640560
   03400 DNA repair and recombination proteins [BR:dwi03400]
    6640560
Enzymes [BR:dwi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     6640560
Transcription machinery [BR:dwi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     6640560
DNA repair and recombination proteins [BR:dwi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     6640560
SSDB
Motif
Pfam: HBB DEAD_2 Helicase_C_2 DEAD ResIII nSTAND3 AAA_11 ALKL1_2 UvrD-helicase
Other DBs
NCBI-GeneID: 6640560
NCBI-ProteinID: XP_002063431
UniProt: B4MQM8
Position
2L
AA seq 769 aa
MKLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYM
IEHPETIRKLIYCSRTVPEIEKVIAELQNLMVYYERHSDNPPAMTGLVLSSRKNMCIHPE
VSKEREGKAVDGKCYGLTASYVRDRHEMDAETPICQYFEGFSLEGKEAALPVGIYSIDDM
KEFGRSRNWCPYFMARHAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNID
NVCIDSMSVKINRRTVERSTNALNQLTKLVQEIREEDTNRLNEEYQRMVQGLKDATVQRD
TDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESSAGFLKD
ISSKICIERKPLRFCAERLSSLLRTLEITDLTEFGALTLITHFATLVSTYTKGFTIIIEP
FDDKTPTVSNPILYFSCMDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSS
FTMTLARPCLLPMIVSKGNDQVAISSKFETREDTAVIRNYGQLLVEVAKTVPDGVVCFFT
SYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVA
RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA
AQCVGRALRGKTDYGIMIFADKRFSRQDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRW
LRRMAQPFTREDQLGISLLTLAQLETMEHEKLERQAQGKEGVGGEVQEL
NT seq 2310 nt   +upstreamnt  +downstreamnt
atgaagctcagtgtagatggtttgcttgtgtactttccgtacgagtatatctatcctgaa
caatatgcttatatgctggaattgaaacgaagtctggacgccaagggacattgtctactt
gagatgccttcaggaactggcaaaacagccaccctgctctctttgattgtcgcctatatg
attgagcatccggagacaattagaaaattgatttattgctcccgcacagtgcccgaaatt
gaaaaggttatagccgagttacagaatcttatggtgtactatgagcgacactccgataat
ccacctgccatgaccggtcttgtactgagttcccgcaaaaacatgtgcatacatcctgag
gttagcaaggagcgtgagggaaaggctgtggatggcaaatgttatggtctgacagctagt
tatgtacgcgataggcatgaaatggatgccgaaacaccaatttgccaatactttgaaggc
ttcagtttggaaggcaaagaagctgctctgccagtgggcatttacagtattgatgatatg
aaggaattcggtagatcacgaaattggtgtccctattttatggctcgacatgcaattgca
cacgcacatattgtggtatatagttaccactatctattggatccaaagatagcccaggtg
gtgtcaaaggaaatgagccgcgaatcttgtgttgtatttgatgaggctcacaatatagac
aatgtatgtatcgactctatgagtgttaaaattaataggcgcactgtggagcgaagtaca
aatgctctaaatcagttgactaaattagttcaagagatacgcgaagaagacacaaatcgc
cttaacgaagagtatcagagaatggttcagggtcttaaagatgccactgtacagcgggat
acggatatgatattagccaatccagtactacccaatgatgtgctcactgaagttgttcca
ggcaacatacgaaatgctgatcattttctcagtttcctgcgacgttttattgaatatatt
aaaacacgtttacgtgtccatcatgtagtgcaagagtcatcggcaggttttctcaaggat
atatcttcaaaaatatgcatagaacgcaaaccattgcgtttctgtgcggaacgtttgtcc
agcttgttgcgtactctagaaattacagatctaactgaatttggtgccctaactctgata
acacattttgccacactagtttcaacgtatacgaaagggttcaccattataatcgagccc
tttgatgacaaaactccaactgtatccaatccgatattgtatttcagttgcatggattca
tccatagcgatggctcctgtattttcacgtttccaaacagtggtcataacatcgggcaca
ctatcaccaatggatatgtatccaaagatcttggacttcgatccggtggtaatgagtagc
tttacgatgactttggcacgtccttgtttgctgcccatgattgtatcaaagggtaatgac
caggtggccatttcatcgaaattcgagacacgtgaggatactgccgttattcgaaattat
ggacagttgctggtggaagtggcgaaaaccgtgcccgatggtgttgtttgctttttcacc
tcctacctgtatctagagtcagtggtggcctcttggtatgaccagggaatcgttgacact
ctgttgagatataagctgcttttcattgagacacaggacaatgccgagaccagctatgct
ctgatgaactatgttaaggcctgcgattgtggtcgcggtgcagtactgttggctgtggcg
cgtggcaaggtctccgaaggtgtggatttcgatcatcattatggtcgcgcggtgctcatg
ttcggcatcccctatgtctatacgcagtcgcgcattctcaaggcccgcctagactatctg
cgtgatcagtttcagatacgtgaaaatgattttcttactttcgatgccatgcgtcatgct
gcccaatgtgttggacgggcgttgcgaggcaaaacggattatggcattatgatatttgcg
gataagcgcttttcgcgccaggacaagcgttcccgtttgcccaaatggatacaagagcat
ttggttgatagtttctgtaatctaagcactgaggaggctgtgcaattggccaggcgctgg
ttgcgacgtatggctcagccgtttacacgtgaggatcaattgggcatttcgttgctcact
ttggcccagctggagacgatggagcacgaaaaactggaaagacaggcccaggggaaagag
ggcgtgggtggtgaagttcaggaattgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (23)   

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