KEGG   Drosophila willistoni: 6648855
Entry
6648855           CDS       T01067                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
  KO
K03006  DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Organism
dwi  Drosophila willistoni
Pathway
dwi03020  RNA polymerase
dwi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dwi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    6648855
  09124 Replication and repair
   03420 Nucleotide excision repair
    6648855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dwi03021]
    6648855
   03400 DNA repair and recombination proteins [BR:dwi03400]
    6648855
Enzymes [BR:dwi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     6648855
Transcription machinery [BR:dwi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     6648855
DNA repair and recombination proteins [BR:dwi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      6648855
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 DUF3137
Other DBs
NCBI-GeneID: 6648855
NCBI-ProteinID: XP_002070845
FlyBase: FBgn0227427
UniProt: B4NDK9
Position
Unknown
AA seq 1890 aa
MSTTTDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGVQFAETMEGGRPKLGGLMDPRQGV
IDRTSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPHNP
KIKEIVMKSKGQPRKRLAYVYDLCKGKTICEGGEDMDLTKENQQPDPNKKPGHGGCGHFQ
PSIRRTGLDLTAEWKQVAEASQEKKIIVSAERVWEILKHITDEECFILGMDPKYARPDWM
IVTVLPVPPLAVRPAVVMFGAAKNQDDLTHKLADIIKANNELRKNEASGAAAHVIQENIK
MLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERID
LRFHPKSSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKM
TKRDVFITREQMMNLLMFLPTWDGKMPQPCILKPRPMWTGKQIFSLIIPGNVNMIRTHST
HPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGTSAGSLLHICFLELGHDIAGRF
YGNIQTVINNWLLLEGHSIGIGDTIADPQTYNEIQMAIKKAKDDVINVIQKAHNMELDPT
PGNTLRQTFENKVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPYGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGELVEFQNMPT
VKLSNKSFEKRFKFDWTNERYMRKVFTDEVIKEMTDSSDAIQELESEWDRLVVDRDSLRQ
IFPNGDSKVVLPCNLQRMIWNVQKIFHINKRLPTDLSPMRVIKGVRGLLERCVIVTGNDR
ISKQANENATLLFQCLVRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVISEDQEFVNVYYEMPDFDPTRIS
PWLLRIELDRKRMTDKKLTMEQIAEKINVGFGEDLNCIFNDDNADKLVLRIRIMNNEENK
FQDEDEAVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETGEF
KAIGEWLLETDGTSMMKVLSERDVDPIRTSSNDICEIFQVLGIEAVRKSVEKEMNAVLQF
YGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAAAHAET
DPMRGVSENIIMGQLPKMGTGCFDLLLDAEKCRFGIEIPNTLGSAMMGGAAMFIGGGSTP
SMTPPMTPWVNCNTPRYFSPQGHASSMTPGGPSFSPAAASDASGMSPSWSPAHPGSSPSS
PGPSMSPYFPTSPSVSPSYSPTSPNYTASSPSGGASPNYSPSSPNYSPTSPLYAATSPRY
ASTTPNFNLQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSN
YTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS
PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPL
YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS
PMYSPTAPSHYSPTSPAYSPSSPTFEESDD
NT seq 5673 nt   +upstreamnt  +downstreamnt
atgagtaccacaacagattccaaagcgcctttgcgccaggtgaagcgcgtacagtttggc
attttatcacccgatgaaattcgtcgaatgtctgtgaccgagggcggtgtgcaatttgca
gagaccatggagggcggtcgtcccaaactgggcggccttatggatcctcgccagggtgtt
attgatcgcacttctcgttgtcagacctgtgccggcaatatgacggaatgtccgggccat
tttggtcacatcgatttggccaaacctgtttttcacattggattcatcacgaaaaccata
aaaatcttacgttgcgtttgtttctattgctcaaaaatgcttgtctcgccgcacaatccc
aagatcaaggaaattgtgatgaaatcaaagggacagccacgtaaacgcttggcctatgtc
tatgatttgtgcaagggcaagaccatttgcgagggcggtgaagacatggatctgacaaag
gagaatcaacaacccgatccaaacaagaaacccggtcatggcggttgtggacattttcag
ccatcgatacgacgaactggactcgatctaacagccgaatggaaacaggtggccgaggcg
tcgcaagagaaaaagatcattgtttcggcggaacgtgtttgggagatattgaaacatatc
accgatgaggagtgcttcatattgggcatggatccaaagtatgctcgacctgattggatg
attgttaccgtactgcctgtacccccgttggccgttcgtccggctgttgttatgtttggg
gcagctaagaatcaagatgatttaacccataaattggccgatattatcaaggcaaataat
gaacttcgcaagaatgaggccagtggagcggcggctcatgtgattcaggagaatatcaaa
atgctgcaattccatgtggccactctggtcgataacgatatgcctggaatgcctcgggct
atgcaaaagtccggtaaacccctcaaagccatcaaagcacgtttaaagggcaaggaggga
cgtattcgaggtaatctgatgggaaaacgtgtggatttctctgcacgtactgtcatcact
ccggatcccaatttgcgtatcgatcaggttggcgtcccacgttcgatagcccagaattta
acgttcccggaattggtgacccccttcaatattgatcgcatgcaggagctggtgcgtcgt
ggtaattcacaatatccgggtgccaagtatatagtacgagataatggtgaacgtattgat
ttgcgctttcatcccaaatcttcggacttgcatctgcaatgcggctacaaagtggaaagg
catctacgcgatgatgatttggttatattcaatcgtcagcccactttgcacaaaatgagt
atgatggggcatcgtgttaaagtcttaccctggtccacattccgtatgaatttgtcttgt
acttcgccctacaatgccgattttgacggcgatgaaatgaatctgcatgtcccccagtcg
atggaaacacgtgccgaggtcgaaaatatccatataacgcccagacagattatcacacca
caggccaataagccggtaatgggtattgtgcaggatacactgactgcagttcgtaaaatg
accaaacgtgatgtcttcataacccgtgagcaaatgatgaacttgttgatgttcctgccg
acatgggatggtaaaatgcctcagccttgtattctgaagccacgacccatgtggacgggc
aagcagatcttctcgctcattatacccggcaatgtcaatatgatacgcactcattctacg
catcccgacgaggaggatgatgggccatataaatggatatcaccgggagataccaaagta
atggtcgagcatggtgaactcattatgggtatcttgtgtaaaaagactttgggtacatca
gctggatccctgttgcatatctgtttcctcgaattgggtcacgatattgctggacgattt
tatggtaacattcagaccgtcattaataattggctactcctcgagggtcacagtattggt
attggtgataccattgctgatcctcagacatataacgagatccaaatggccatcaagaag
gccaaagacgatgtcataaacgttatccaaaaggcccataatatggaactggatcccacg
ccgggtaacaccttgcgtcagacattcgagaataaagtgaatcgtattctgaacgatgct
cgtgacaaaactggtggttcagccaagaagtccctcacagaatacaacaatctaaaggct
atggtggtgtccggatccaaaggttccaatattaatatctctcaggttattgcttgtgtg
ggccaacagaacgtggagggcaaacgtataccatacggattccgaaagcgtactctacca
catttcattaaggatgattacggtcccgagtctcgcggctttgtggagaactcgtatctt
gccggcctgacgccatccgaattctatttccatgccatgggtggacgtgaaggtctgatt
gataccgctgtaaagacagctgaaactggttacatccaacgtcgtctgatcaaagctatg
gagtcggttatggtcaactatgatggaactgtgcgtaactcggtgggtcagttgattcag
ttgcgttacggcgaagatggtctatgcggtgaattggtcgagttccaaaatatgcccacg
gtcaagctatcaaacaaatcattcgagaaacgcttcaaattcgattggaccaatgaacgt
tatatgcgcaaagttttcaccgacgaggtgatcaaagagatgaccgacagcagtgatgcc
atacaagaattggagtccgaatgggatcgcctggtagtggatcgtgacagtttgcgtcaa
atattcccgaatggtgattccaaggttgtcctgccttgcaatctgcagcgcatgatatgg
aatgtgcagaagatctttcatataaataagcgtctgcccacggatttgtcgcccatgcgc
gtcatcaagggtgttagagggctcctggaacgttgtgtcattgtgacgggcaatgatcgt
atctctaagcaggctaatgagaatgccacattgctattccagtgtctggttagatcgacg
ctttgcaccaaatacgtgtccgaggagtttcgcctttcgacggaggccttcgagtggttg
atcggtgaaattgagacacgtttccaacaggctcaggccaatccaggtgaaatggttgga
gccttggccgcccaaagtttgggtgagcccgccacacagatgacattgaacactttccat
tttgctggtgtgtcatcgaagaacgtaacattgggtgtgccgcgtctcaaggagattatc
aatatatccaagaaaccaaaggctccatctctaacggtgttcctcacaggaggcgctgcc
cgcgatgctgagaaggccaagaatgtgttgtgccgcttggagcacaccacattgcgtaag
gtcaccgccaacacggccatttattacgatcctgatccccagcgtacggtcatatcggaa
gatcaagagttcgttaatgtctactatgaaatgcctgatttcgatccgactcgcatatca
ccttggctgctgcgtatagaattggatcgcaagcggatgacagataagaaattaaccatg
gaacagattgctgagaagattaatgtcggattcggcgaggatctgaattgcattttcaat
gacgacaatgccgataaattggtcctacgaattcgtattatgaataacgaggagaacaaa
ttccaagacgaagatgaggccgtcgataagatggaagatgatatgttcttgcgttgcatc
gaggccaatatgttatccgatatgacattgcagggtatcgaagctattggtaaggtgtat
atgcatttgcctcaaaccgatagcaagaaacgtatcgttataaccgaaacgggagagttc
aaggcgattggtgaatggctactggaaactgatggtacgtccatgatgaaagttctctcc
gaacgggatgtggatcccataagaacctcatcgaacgacatttgtgagatattccaagtg
ctgggcattgaggctgtgcgtaaatcagttgaaaaggaaatgaatgcggttctgcagttc
tatggtctttacgtgaactatcggcatttggctttgctgtgcgatgttatgacagccaag
ggacatttgatggccatcacacgtcacggcatcaatcgacaggatactggcgctctaatg
agatgttccttcgaggagacggtggatgtgctcatggacgctgccgctcatgctgaaact
gatcctatgcgcggtgtctctgaaaacattataatgggacaattgcccaaaatgggtaca
ggatgcttcgatctgctgctcgatgccgagaaatgtcgattcggcattgagataccgaac
acactgggcagcgcaatgatgggcggtgctgccatgtttattggaggcggttccacgcct
agcatgacaccgccaatgacaccttgggtgaactgtaatacaccgaggtacttctctccg
caaggacatgccagctccatgactccgggaggaccaagcttctcaccggctgcagcctca
gatgcctctggcatgtcacccagttggtcaccggctcatccaggatcctcgccaagttca
ccgggaccctctatgtcaccatacttccccacttcgcccagcgtgtcgccgtcgtattca
ccaacttcaccgaactacacagcctcttcaccaagtggtggagcttcacccaattattca
ccatcgagtccgaactattcaccgacttcgccgctatatgcggccacaagtccacgttac
gcatcgacaacgcccaactttaatctacaatccactggctattcgccctcatcgtcgggc
tattctcccacatcgccagtttactcgcccacatcgaatttccagtcaagtccatcgttt
gccggcagtggcagtaacatgtactccccgggaaatgcgtactcgccctcctcgtcaaat
tacacaccgaattcgccatcatattcgcccacttctccgtcatattcaccctcgtcgcct
tcgtactcgcccacttctccttgttattcacccacgtcgccgtcatattcgccaacctcg
ccaaactatacccctgtcacgccctcctattcgcccacctctccaaactattcggcatca
ccgcattattcgcccgcttcgccggcgtattcgcaaaccggcgtcaaatactcgccaact
tcaccgacatattcgccgccatcgccatcgtacgatggttcgcccggttcgccacaatat
acacccggttcgccgcaatattcaccagcttcgcccaaatattcacccacttcaccgctc
tattccccaagctcgccgcagcactcgccctccaatcaatacagtccgactggttcgaca
tactccgccacaagtccacggtattctccaaatatgtcgatctattcaccgagtagcaca
aaatattcccccacatccccaacctatacgccaacggcacgaaattattcacccacatcg
cccatgtactccccgacagcgccctctcactatagtcccacgagtcccgcgtattcgcca
agcagtcccacatttgaggagagtgacgattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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