KEGG   Deinococcus wulumuqiensis: DVJ83_00235
Entry
DVJ83_00235       CDS       T05579                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
dwu  Deinococcus wulumuqiensis
Pathway
dwu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dwu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DVJ83_00235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dwu03400]
    DVJ83_00235
Enzymes [BR:dwu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     DVJ83_00235
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     DVJ83_00235
DNA repair and recombination proteins [BR:dwu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     DVJ83_00235
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS OrfB_Zn_ribbon DZR Zn-ribbon_8 Auto_anti-p27 Zn_Tnp_IS91
Other DBs
NCBI-ProteinID: AXG99956
UniProt: A0A345IJT4
Position
49131..50003
AA seq 290 aa
MFCPALAYPRRMPELPEVETTRRKIEPLLRGKVIERLAHDAPHKYPNTHLAHGKRVRALT
RRGKYLLLHLAAADAAEDGPHDLELVVHLGMTGGFRLEEGPHTRVTFELEGGEKLYFNDP
RRFGKVSAVRPGEYASMPTLAAMGPEPLSDDFTEAEFVQAAAGCGAVKVWLLSQKPVSGV
GNIYADESLWLSKIHPAQTKLTADEASRLYHAVREVMHEAVERGGSSLGNGVGNYRQHDG
EGGGYQTRHHAYGKTGQPCERCGTPIEKIVLGQRGTHFCPACQQVRKADS
NT seq 873 nt   +upstreamnt  +downstreamnt
gtgttctgcccagctttggcctatcctcgccgcatgcccgaactgccggaagtggaaacg
acccgccgcaaaatcgagccgctgctgcgcggcaaggtcatcgagcggctggcccacgac
gccccgcacaaatacccgaacacccacctcgcgcacggcaaacgggtgcgtgccctgacc
cgccggggcaaatacctgctgctgcacctcgcggcggcggacgcggcggaggacgggccg
cacgacctcgaactcgtcgtgcacctcggcatgacgggcggtttccggctggaagagggg
ccgcatacccgcgtcaccttcgaacttgaaggcggcgaaaaactctatttcaacgacccc
cggcgcttcggcaaggtctcggcggtgcgccccggcgagtacgcgagtatgcccaccctc
gccgcgatggggccggagccgctttcggacgacttcaccgaggccgagttcgtgcaggcg
gcggcggggtgcggcgcggtcaaggtctggctgctctcgcaaaagcccgtgagcggcgtg
ggcaacatctacgccgacgagagtttgtggctgtccaaaatccatcccgcgcagacgaaa
ttgactgccgacgaagcgtcccggctctatcacgcggtgcgcgaagtgatgcacgaggcg
gtcgagcggggcggcagttcgctcggcaacggcgtcggcaactaccgccagcacgacggc
gagggcggcggctaccagacccggcaccacgcctacggcaagaccgggcagccgtgcgaa
cgctgcggcacccccatcgagaaaatcgtgctggggcagcgggggacgcatttttgccct
gcttgtcagcaggtgagaaaggcggatagctga

DBGET integrated database retrieval system