KEGG   Dysgonomonas sp. HDW5A: G7050_06685
Entry
G7050_06685       CDS       T06482                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
dys  Dysgonomonas sp. HDW5A
Pathway
dys03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dys00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    G7050_06685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dys03019]
    G7050_06685
   03009 Ribosome biogenesis [BR:dys03009]
    G7050_06685
Enzymes [BR:dys01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     G7050_06685
Messenger RNA biogenesis [BR:dys03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     G7050_06685
Ribosome biogenesis [BR:dys03009]
 Prokaryotic type
  rRNA helicases
   G7050_06685
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1
Other DBs
NCBI-ProteinID: QIK59532
UniProt: A0A6G7X4W9
Position
complement(1617223..1619052)
AA seq 609 aa
MKTFEELGVAPEIRRAIEEMGYESPMPVQEEVIPYLLDEVRDVIALAQTGTGKTAAFGLP
LLQKVDVKKNVPQALILAPTRELCLQIAGDLADYSKYIDNLRVLPVYGGSSIDSQIKTLR
RGVQVIVATPGRLIDLINRRTVDLENIKYVVLDEADEMLNMGFTESIDEILSKVPDTRSM
LLFSATMPNEIAKITKKYMREPKDITIGRKNEGSSNVKHVYYMVHAKDKYLALKRIADYN
PSIYGIVFCRTRRETQEIADKLIQDGYSADSLHGDLSQSQRDYVMQKFRMHNIQLLIATD
VAARGLDVDSLTHVINYGLPDDIESYNHRSGRTGRAGKTGISIAIAHVKEKGKIREIEKI
MNKKFEAATVPSGDEICEKQLLSFADKIEKVKVNEEEIARLLPSIYRRLEWLEKEDIIKR
VVSMEFNRLIDYYREADEIEAPSDRYNSRDDRGMPSRNSRRGEDRFESRGNGGSRSAEKG
YARLFINLGRTDNANPATLMGLINDFVPGKVRIGRIDLLPNFSFFEVPEGDAQRVISGLK
GQEQNGRRISVEEAQGGAPAERREGASRRPSSYGGGGDRAPKRREGGSSSFGGGDKKEHR
KGGRKPKFS
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgaagacatttgaagaattaggtgttgctccggaaatccgtagagcgatcgaagaaatg
ggttatgaaagtccaatgcccgtacaagaggaagtgattccttatttattggacgaggtt
agagatgttatagcattagcacagacaggaacaggtaaaacagcagctttcgggcttcct
cttctacaaaaagtagatgtaaagaaaaatgtaccacaagcattaattttagctcctaca
cgcgaactatgtttgcagatagcaggtgatctggcagattattctaaatatattgacaac
ttgagagtgcttcctgtatatggaggttcaagtattgacagccaaattaaaacattgaga
cgtggtgtacaagtaattgtggctactcccggtcgtctgatcgacttgatcaacagaaga
acagttgatcttgaaaacatcaaatacgtagtattggatgaggctgacgaaatgttgaat
atgggattcactgagagtatcgatgagattctttccaaagtgcccgatactcgttctatg
ttgcttttctcggctactatgcctaacgaaattgcaaaaattacgaaaaaatacatgcgt
gaacccaaagatattaccattggtcgtaaaaatgaaggttcgagcaatgtaaagcatgtg
tattacatggtgcacgctaaagataaatatctggcgttgaaacgtatcgctgactacaat
ccaagtatatatggtatcgttttctgtcgtacccgtcgcgagactcaggagattgcagac
aaactgatacaagacggttatagtgcagattcattacacggagatctatctcaatcacaa
cgtgattatgtaatgcaaaaattccgcatgcacaatatccaattattgattgcaacagac
gttgctgctcgtggtttggatgtggatagcttgactcacgtaatcaattacggtttacct
gacgatatcgaatcgtataaccaccgtagtggtcgtacaggtcgtgccggaaaaacaggt
atctcgattgcgattgcacacgtgaaagaaaaaggtaaaatccgtgagatcgaaaaaata
atgaacaaaaagtttgaagcagctacagttccttcgggagatgagatttgcgaaaaacaa
ttgttaagctttgcagacaaaatagaaaaagtaaaagtaaacgaggaagaaattgcccgt
cttttaccttcgatataccgtcgtttggaatggcttgaaaaagaagatatcatcaaacgt
gttgtttcaatggaatttaatcgtttgatcgattattaccgcgaagcagacgaaatagaa
gctccatctgacagatataacagtcgtgatgacagaggtatgccatctcgtaacagcaga
agaggcgaagaccgcttcgaatcaagaggtaacggaggttctcgttcagcagaaaaagga
tatgcccgtttattcatcaatttaggacgtacagataatgcaaatcctgctacattgatg
ggcttgattaacgatttcgttccgggaaaagtgagaatcggtcgtattgatttacttcct
aacttctcattctttgaagtacccgaaggtgatgctcaacgtgtaatcagcggactgaaa
ggtcaagagcaaaacggacgccgtatttcagtagaagaagctcaaggcggtgctcctgca
gaacgtcgtgaaggtgccagcagaagaccatcttcttacggaggtggtggcgacagagct
cctaaaagacgcgaaggaggcagttcttcttttggtggtggagacaaaaaagaacaccgt
aaaggtggtcgcaaaccaaagttttcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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