KEGG   Dickeya zeae: W909_05220
Entry
W909_05220        CDS       T03567                                 
Name
(GenBank) transcriptional regulator
  KO
K03530  DNA-binding protein HU-beta
Organism
dzc  Dickeya zeae
Brite
KEGG Orthology (KO) [BR:dzc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dzc03032]
    W909_05220
   03036 Chromosome and associated proteins [BR:dzc03036]
    W909_05220
   03400 DNA repair and recombination proteins [BR:dzc03400]
    W909_05220
DNA replication proteins [BR:dzc03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    W909_05220
Chromosome and associated proteins [BR:dzc03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    W909_05220
DNA repair and recombination proteins [BR:dzc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      W909_05220
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: AJC65504
Position
1091155..1091427
AA seq 90 aa
MNKSQLIDKIAADADISKAAAGRVLDAIIGSVTESLKAGDDVALVGFGTFSVRERAARTG
RNPQTGKEISIPAAKVPGFRAGKALKDSVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaagtcacaattgatcgacaaaattgccgcagatgctgatatttccaaagcggca
gcagggcgtgtgttggatgcaattattgggtctgttaccgaatctctgaaagccggagat
gacgtcgctttggttggttttggtacgttttccgtgcgtgaacgtgctgcgcgcaccggg
cgtaacccgcagactggcaaagaaatcagtattccggcggctaaagtacccggtttccgt
gccggtaaagcactgaaagactcagtgaattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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