KEGG   Dickeya zeae: W909_10010
Entry
W909_10010        CDS       T03567                                 
Name
(GenBank) RNA helicase
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:3.6.4.13]
Organism
dzc  Dickeya zeae
Brite
KEGG Orthology (KO) [BR:dzc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dzc03009]
    W909_10010
Ribosome biogenesis [BR:dzc03009]
 Prokaryotic type
  rRNA helicases
   W909_10010
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII Helicase_C_2 CMS1 CAAP1 AAA_19 YlmH_RBD
Other DBs
NCBI-ProteinID: AJC66381
Position
complement(2211157..2212530)
AA seq 457 aa
MTSFAELNALSAEQLTTLNELGYLSMTPIQAAALPAALAGKDVRAQAKTGSGKTAAFGLG
LLQHLDAGQFNTQSLVLCPTRELADQVANELRRLARGMPNIKVLVLCGGVPFSIQRDSLI
HAPHIIVATPGRLLDHLKKETVSLDALQTLVLDEADRMLDMGFADAIDEVIHHAPVERQT
LLFSATWPEAIAAISRRIQRDPVVIEIDTVDELPAVEQQFYEVSRNGKLDLLQKLLSREQ
PASCVVFCNTKKDCQAVYDALTHSNQSVLALHGDMEQRDRDQTLVRFANGSSRVLVATDV
AARGLDIKALEMVINYELSWDPEVHVHRIGRTARAGEQGLAISLCAPEEAQRANALEEML
KMKLTWHPLPSGLRITPLDAAMATLCIDGGKKAKMRPGDILGALTGDMGLDGADIGKITI
HPMHAYVAVRQSLARQVWKQLQQGKIKGKAVKVRLLK
NT seq 1374 nt   +upstreamnt  +downstreamnt
gtgacctcatttgctgaactgaacgcgctttctgcggaacaactcaccaccttaaacgaa
ctggggtatttgtccatgaccccgattcaggctgccgcattaccggctgccctcgccggt
aaagatgtccgggcgcaggcgaaaaccggcagcggtaaaacggcggcttttgggctgggc
ctgctgcagcatttggatgccgggcagtttaatacacagtcgttggtgctgtgcccaacc
cgcgaactggctgatcaggtcgccaatgagctgcgtcgtctggctcgtggtatgccgaac
atcaaagtgttggtgttgtgcggcggtgtaccgtttagcatccagcgtgactcgctgatt
catgctccccatattattgtcgccacaccgggccgactgttggatcacctgaaaaaagag
accgtcagcctcgatgcattgcagacattggtgctggatgaagcggatcgcatgctcgat
atggggtttgccgatgccatcgacgaggtgattcaccacgcaccggtcgaacgccagaca
ctgctgttttccgccacctggccggaggcgattgccgccatcagccgtcgtattcagcgt
gatccggtggtcattgaaattgacacggtggatgaattgccagcggtcgagcagcaattc
tatgaggtgtcgcgcaacggcaagctcgatctgctgcaaaagttgctgagccgtgaacag
cccgcgtcctgcgtcgtgttttgtaataccaagaaagattgtcaggcggtatacgatgcg
ctgacccacagtaaccaaagtgtactggcgctgcacggcgacatggagcagcgcgatcgc
gaccagacgttggtgcgttttgccaacggcagcagtcgtgtgctggtggcaaccgacgtt
gctgcacgcgggctggatatcaaggcactggagatggtgattaactacgaactgtcgtgg
gatcctgaagtgcatgtccatcgtatcggccgtaccgcccgtgccggtgaacagggtctt
gccatcagcctgtgtgcaccggaagaagcacagcgagcgaatgcgctggaagagatgctg
aagatgaagctgacctggcatccattgcccagtgggttgcgtatcacgccactggacgcg
gcgatggcaacgctgtgtattgatggtggcaaaaaggccaaaatgcgccccggcgatatt
ctgggcgcgctaaccggcgacatggggcttgatggtgcggatatcggcaagattactatc
cacccgatgcacgcttatgtggccgtcaggcagtcgctggcgcgtcaggtttggaagcaa
ctacaacaaggcaaaattaaagggaaagcagtaaaggtcaggctgctaaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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