KEGG   Durio zibethinus (durian): 111293210
Entry
111293210         CDS       T05242                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
  KO
K12897  transformer-2 protein
Organism
dzi  Durio zibethinus (durian)
Pathway
dzi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111293210
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dzi01009]
    111293210
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dzi03041]
    111293210
Protein phosphatases and associated proteins [BR:dzi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     111293210
Spliceosome [BR:dzi03041]
 Common components
  Common spliceosomal components
   SR proteins
    111293210
SSDB
Motif
Pfam: RRM_1 RRM_5
Other DBs
NCBI-GeneID: 111293210
NCBI-ProteinID: XP_022741745
UniProt: A0A6P5YN82
Position
Unknown
AA seq 308 aa
MADFPRKRDSQSHSPWREQTRSRSRSRSRSRSRPRSRSRSRSCSWLRPRHRSRSHSRGRS
RSRSRGRADAGKPGNTLYVTGLSQRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF
VTMDNIEDANRCIKYLNQSILEGRYITVERSRRKRPRTPTPGHYLGLKNTRDYGRGERGR
YRGGRDDYGYRRSPRCSPYRGRDYSPRYSPRGGRARVERSYSPYSRGSRKQLQGFQPWIV
ELSLQLIPMNCLCHHNNGRLEPISIVSGVPFTWSTCFWAILRLGLATGLCFSCLSLGLWL
VRSLPARR
NT seq 927 nt   +upstreamnt  +downstreamnt
atggccgattttcctcgtaaaagggattctcagtcccactccccatggagagagcagacc
aggtcacggtccagatccagatccagatctagatctagacccaggtctaggtctaggtct
aggtcttgctcctggttaaggcctaggcataggtccaggtcacatagtcggggcaggtca
aggtctagaagtcgtggcagggctgatgctggaaaacctggaaacacactttatgtgacg
ggtctatctcaaagggtcacagagagggacctcgaagagcacttctcgaaggagggaaag
gttgcatcatgttttctcgttgttgaacctcgtactcgcatatcacgtggttttgctttt
gttacaatggacaatattgaggatgccaaccgctgtattaagtatctcaaccaatcaatt
ttagagggtcgatacataactgtggagaggtcacgtaggaaacgcccaagaactccaact
ccggggcactatcttggactgaaaaataccagggattatggtcgtggtgagcgtggcagg
tatcgtggtggccgtgatgactatggatatcgtcgatctccaagatgctcaccataccga
ggtcgtgattactctccaagatattctcctcgaggtggaagagcaagggtggagcgttct
tattcaccttattctcgtggttcacgaaagcagcttcaaggtttccagccctggatagtg
gagttgtctttgcagttaatccccatgaactgcttgtgtcaccacaacaatggccggtta
gaacctatctcaattgtcagcggagtaccgtttacctggtcgacatgtttctgggctatt
ctgaggctgggcttggcgacaggtctttgtttctcatgcctttcattgggcttatggctt
gtcaggtcactccccgcccgcagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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