KEGG   Durio zibethinus (durian): 111295979
Entry
111295979         CDS       T05242                                 
Name
(RefSeq) uncharacterized protein LOC111295979 isoform X1
  KO
K06100  symplekin
Organism
dzi  Durio zibethinus (durian)
Pathway
dzi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111295979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dzi03021]
    111295979
   03019 Messenger RNA biogenesis [BR:dzi03019]
    111295979
Transcription machinery [BR:dzi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     111295979
Messenger RNA biogenesis [BR:dzi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     111295979
    U7-dependent histone pre-mRNA processing factors
     111295979
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N HEAT_EZ HEAT HEAT_2
Other DBs
NCBI-GeneID: 111295979
NCBI-ProteinID: XP_022745641
UniProt: A0A6P5YZY1
Position
Unknown
AA seq 1362 aa
MVNPVSREMLSRLSNSVNLAIDLASKLDLCRQLKQDLLKEDAAALSEFLPRLFDLYSDPS
GPVRKFATEIIGEIGVKHLEFVTEIAPFLITVLEDATPAVARQSIACSIDLFRHTLEKIA
IQGYNYLQGKLFLFCLHLLLSCVNFSRKGLYSSELDSDLESSWSWMLKLKEKIYSIAFQP
GSGGIRLVALKFVEAVILLYTPDPNGSPEPPSDGGTPIEFNIAWLRGGHPLLNVGDLSIE
ASQRLILLLDQLRFPTVKSLTSSVIVVLINSLSAIAKKRPAYYGRILPVLLSLDPPSYVI
KGVHVYGAHHALKNALLSCLKCTHPSAAPWRDRLLGALREMKGGGLAELALNQAHKINGS
VEEEKDDSSVIKEEKPLIKACDVVGTNVGRKRSGTEDNSDLAENDDVSGKRVRSTPSVSE
ESTKELNRNTTMSQGDIFSTQPTTNKGDVDTGPVQQLVAMFGALVAQGEQAVGSLGILIS
SISADLLADLVMANMGNLPPSHPHTDGDDELLENMCIVGSDTQAKYPPSFLADVVSLSST
FPPIASLLNSRQSVSNKIVIQKTEGEEEVDVVAGPNNAVAHAGMAHEAENALLAADLPVS
SDIVLPGMEKIDLPTPSDIQDVGNLESEIPGLDSSVHNDGLSDTQAASSLVSTDLEDASQ
DQVTSFGGRSLLHVLPSISTDRSEELSPKAVVTDSNSMISSTATSVVSSYCFVLPKMSAP
VVNLSDDQKDDLQKLAFIRIIEAYKQIAVAGGSQVRFSLLAYMGVELPSELDLQKLLQEH
ILSDYINHEGHELTLRVLYRLFGEAEEESDFFSCTTAASAYETFLLAVAETLRDSFPPSD
KSLSRLLGEAPRLPKSVLNLLEGLCSPGISEKTEKESLSGDRVTQGLSTVWSLILLRPPI
RDVCLKIALQSAVHHLEEVRMKAIRLVANKLYPLSSIAQQIEDFAREMVLSVVNADGTER
TDAEGLITESRKDSDSEKPSNEHQSMSSISKDISDDVHQSETSQSVSSLSVPEAQRCMSL
YFALCTKKHSLFCQIFLIYSSASKAVKQAIHRHIPILVRTMGSSSDLLEIISDPPSGSKN
LLMQVLHTLTEGTVPSAELIFTIKKLFDSKLKDVEILVPVLPFLPRDEVLLLFPYLVNLL
PDKFQAALTHLLQGSSHSGPVLSPAEVLIAIHGIDPERDGIPLKKVTDACNACFEQRQIF
TQQVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPALVEFIMEILSRLVSKQIWKYPKLWV
GFLKCALLTKPQSFSVLLQLPPPQLENALNRTAALKAPLVAYASQQNIRASLPRSVLAVL
GLAPDSQSSSQVQTSQALHTGDTSNSEKDAVAEKSKESSSAS
NT seq 4089 nt   +upstreamnt  +downstreamnt
atggtgaatccagtttcgagggaaatgctttcaaggttatccaactcagtgaatctagct
attgacttagcttcaaagctcgacctctgtcgtcaattgaagcaagacttattgaaggaa
gacgctgctgctctgtccgagttccttcctcgactcttcgacctttactctgacccgtcc
ggtccggttcgcaaatttgctactgagattattggtgaaattggtgtgaagcaccttgaa
ttcgtaactgaaattgcaccgtttctgataactgttttggaagatgctacacctgctgtt
gctcgacaatctattgcttgcagtattgatttgtttcgccatacgctggaaaaaattgca
attcagggatacaattatttacaaggaaaactgtttttgttttgtctccacttgctgtta
agttgtgttaattttagccgtaagggtctatactccagtgagttggacagtgatcttgaa
tcatcgtggtcatggatgttaaagttaaaggagaagatatactctatagcttttcagcca
ggaagtggtgggataagattggtggctctgaagtttgttgaagcagttattcttctttat
actcctgatcctaatggttctccagagcccccttctgatggaggaacccctatagaattt
aacatagcttggcttcgtgggggccatcctttactcaatgttggggatttgtcgattgaa
gctagccaacgtttgattttgttgcttgatcagcttagatttccaacagtaaaatcgctc
accagctcggtcattgttgtgcttattaacagtctttcagcaattgcaaagaaacggcct
gcatattatggacgtattctaccagttttgcttagtttggatcccccaagctatgttatc
aaaggggttcatgtgtatggagcacatcatgctttgaaaaatgccttactctcctgcttg
aaatgtacacacccaagtgctgcaccgtggagggatcgtttacttggtgccttgagagag
atgaaaggtggaggactggcagagctagctctaaaccaagctcataaaattaatggaagt
gtggaagaggaaaaagatgattcttcagtcataaaggaagaaaaacccttgattaaagca
tgtgatgttgttggtaccaatgtgggaaggaaaagatctggaactgaggacaatagtgat
ttggctgaaaatgatgatgtgtctggaaaacgtgtcaggtcaacacctagtgtctcagaa
gagtcaacaaaagagttaaacaggaatactactatgtctcagggtgacattttttcaact
caacctaccacaaacaaaggagatgttgatactggaccagtccagcaacttgttgccatg
tttggagccttggttgctcaaggagaacaagctgtgggatctttggggattcttatttca
agcatatctgctgacttgctggctgatttagtgatggctaacatgggtaaccttcctccc
agtcatcctcacactgatggagatgatgaattgctggagaacatgtgcatagttggaagt
gacactcaagccaagtatccaccatcatttttagctgatgttgtttcactgtcgagtact
ttcccgccaatagcctcattacttaattctcggcaatcagtttccaataaaatagtgata
cagaaaacagaaggggaggaagaagttgatgttgtggctggcccaaataatgctgttgca
catgctggcatggctcatgaggctgaaaatgctttgttggctgctgatttaccagtttct
tctgacattgttttgcctggaatggagaagattgatctacctactccgtctgatatccaa
gatgtggggaatcttgaaagtgagatacctggtttggattcttctgttcataatgatgga
ttgtcagatacccaggcagcttcctcgttggtctctactgatctagaagatgctagtcaa
gaccaagttacaagttttggtggaaggtcactgctgcatgtgcttccatcaatttcaaca
gataggtctgaggagcttagtccaaaagcagttgttaccgattccaacagcatgatttcc
tcaacagcaacttccgttgtttcatcctattgctttgtcttgcccaagatgtcagcacct
gttgttaatctttctgatgatcagaaggatgatttgcaaaagttggcttttatacgtatc
attgaggcatacaagcaaatagcagtagctggaggttctcaagttcgcttttctctgctt
gcttatatgggagttgagttgccatcagagttagacctacagaaacttctacaagaacac
attttgtcagattatataaatcatgagggacacgagttgacattgcgtgtcctctacagg
ttatttggagaggcagaagaggaaagtgatttcttctcatgtacaactgctgcttccgca
tatgaaacattccttctggctgtagctgaaactcttagggactcttttccaccttctgac
aaatctttaagtagactacttggtgaagctcctcgcctgccaaaatcggttttgaattta
ttagagggtttgtgctctcctggaatctcagagaaaactgagaaggagtcactaagtgga
gatagagttactcaaggcctcagcaccgtatggagtctaattctattgagaccccccatt
cgagatgtgtgcttgaaaattgctttgcagagtgctgttcatcacttggaggaagttcga
atgaaagcaatacgtctggtagctaataagctttaccctctatcatccattgctcaacaa
atagaagattttgccagggaaatggtgctctctgtagtaaatgctgatggtacagaaaga
acagatgctgaaggattaatcactgaatcacgtaaggattctgattcagaaaagccgtca
aatgagcatcagtcaatgagttccattagtaaagacatctctgatgatgttcatcagtca
gaaacatctcagagtgtgtcatccctttctgtccctgaggcacagcggtgcatgtctctg
tattttgctctgtgtacaaagaagcactctcttttttgccaaatatttcttatctacagt
agtgcatcaaaggcagttaagcaggcaatccatcgtcatattcccatactagttcgtacc
atgggctcgtcatctgaccttcttgaaattatttcagatcctcctagtggaagcaagaat
cttctgatgcaggtattgcatacactgactgaggggacggttccttcagcagaattgata
tttaccattaagaagttatttgattcaaaattaaaggatgttgaaattctagttccagta
ttgccattcctaccaagagatgaggttttgctgctctttccgtatcttgtaaatcttctg
ccagataagttccaagctgcacttacccatttgctacagggatcttctcattctggtcca
gtgctctctccagctgaagtgttaattgctatccatggcattgatcccgaaagagatgga
attcccttgaagaaggtcacagatgcatgtaatgcttgttttgagcaacggcagatattc
acccagcaagttctagcgaaggtcttaaatcagttggttgagcagattcctcttcctttg
ttgtttatgcgtactgtattacaagccattggtgcttttcctgcattggtggaatttata
atggagattctttctcgtcttgtaagcaagcagatatggaaatacccaaagttgtgggta
ggatttttgaaatgtgcactcttgacaaagcctcaatctttcagcgtgttgcttcagcta
cctcctccacagctggaaaatgcactgaatagaactgcagcgctcaaagctcctttggtt
gcttatgctagccaacagaatatacgagcttcacttccaaggtctgtattggcagttttg
ggacttgctccggattctcagtcttccagtcaggtacaaacaagtcaggctcttcacact
ggagatacaagcaattcagagaaagatgcagtggcagagaaatctaaggaatcatctagt
gctagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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