KEGG   Durio zibethinus (durian): 111296365
Entry
111296365         CDS       T05242                                 
Name
(RefSeq) THO complex subunit 1 isoform X1
  KO
K12878  THO complex subunit 1
Organism
dzi  Durio zibethinus (durian)
Pathway
dzi03013  Nucleocytoplasmic transport
dzi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111296365
  09122 Translation
   03013 Nucleocytoplasmic transport
    111296365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dzi03019]
    111296365
   03041 Spliceosome [BR:dzi03041]
    111296365
Messenger RNA biogenesis [BR:dzi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     111296365
Spliceosome [BR:dzi03041]
 Complex C
  Other components
   EJC/TREX
    111296365
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111296365
SSDB
Motif
Pfam: efThoc1 CENP-X
Other DBs
NCBI-GeneID: 111296365
NCBI-ProteinID: XP_022746368
UniProt: A0A6P5Z0W6
Position
Unknown
AA seq 620 aa
MDAFRRAILQPGPPETFALKTVQEVIKPQKQTKLAQDENQLLENLLRTLLQELVASAVQS
GEEIMQYGKSIDDEDETQGVIPRLLDVVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKD
IFRYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKDPPEGISVDFNFYKTFWSLQEYFCNPASLSTAPIKWQKFT
SSLMVVLNTFEAQPLSEEEGADNNLEEEATTFNIKYLTSSKLMGLELKDPSFRRHILLQC
LILFDYLKAPGKNDKDSSESMKEEIKSCEDRVKKLLELTPPKGKDFLHSIEHILEREKNW
VWWKRDGCPPFEKQPIEKKTVHDGAKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVR
TPAISDYWKPLAEDHASSWNKFISFLKLQMDESAGIDAEYHHKNNRVYCWKGLRFSARQD
LEGFSRFTEHGIEGVVPLELLPPEVRSKFQGKPSDRSKRAKKEETKGALHQVEESQIATP
ASEIDGEGVRADAEASAAPMDTDATAATENNSQGSTPTPDEHQKQSPDTQEAGQLEADAE
VEAGMIDGETDPEAESDHVG
NT seq 1863 nt   +upstreamnt  +downstreamnt
atggacgcatttaggagggctatactgcagcctggccccccggaaacttttgctctcaag
acagttcaagaggttataaagccgcagaaacaaacaaagttagctcaagatgaaaatcaa
ttgttagagaacttgcttcggactttgcttcaagaattggtggcatctgcagtacagtca
ggggaggagataatgcagtatggaaagtcaattgatgatgaggacgaaacacagggtgta
attccacgacttctagatgttgtgctctatctttgtgagaaagaacatgttgaaggtggt
atgatattccagcttctagaggacttgactgagatgtctacaatgagaaattgcaaagat
attttccgatatatagagagtaagcaagacatcctggggaagcaagagctttttgctcgc
ggaaaacttgtcatgttgagaacgtgcaatcaacttcttcgccgactgtccaaggcgaat
gatgtggtattttgtgggcgaatcctaatgtttctggcacatttctttccattgtctgaa
cgttcagctgtgaatattaagggtgtttttaacacatcaaatgagacaaaatatgagaaa
gacccacctgaaggcatttctgttgatttcaacttttataaaactttctggagtttacag
gaatacttttgcaaccctgcgtccctttcaactgctcctatcaagtggcagaaatttaca
tctagtttgatggttgtgttgaatacatttgaagctcagcctttaagtgaggaagaggga
gctgataacaatttggaggaagaggcgacaactttcaacataaaatatcttacaagcagt
aaattgatgggcttagagttaaaagatccaagttttcggcgccacattcttttgcagtgc
ctcatattatttgattatctgaaggccccaggaaagaatgataaggattcatctgaaagc
atgaaagaagaaattaagtcttgtgaagatcgagtgaagaaactacttgaactgactcct
ccaaaaggaaaagattttcttcatagtattgagcatatattggaacgtgaaaagaattgg
gtctggtggaaacgcgatggctgtcctccatttgaaaagcaaccaatagagaaaaaaaca
gttcatgatggagctaagaaacgtaggccaaggtggagattgggaaataaagaactctct
cagttgtggaagtgggctgatcagaatccgaatgctttgactgatccccaacgtgttcga
actcctgccatctcagattactggaaacccttggctgaagatcatgcgagctcttggaat
aaattcatctctttcttgaaattacagatggatgaatctgcaggaatagacgctgaatat
catcataaaaataacagggtttattgctggaagggccttcgtttttctgctcggcaagac
ttagaagggttttctagatttactgaacatggtattgaaggagtagttcctttggaactt
ctcccgcctgaagtgcgatccaagttccaaggtaaacctagtgacaggtctaaacgtgct
aaaaaggaggagacgaagggtgctttgcatcaagttgaagaaagtcagattgcaacacct
gcaagtgagattgacggcgaaggagtcagagctgatgcggaggcatctgcagcaccgatg
gatacggatgcgactgctgcgaccgaaaataattcccaaggtagcactccaacaccagat
gaacatcaaaagcaaagccctgatactcaagaagctgggcaattagaagcagatgctgaa
gtagaggctgggatgatagatggggagacagatccagaagctgagtcagatcatgtagga
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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