KEGG   Durio zibethinus (durian): 111308090
Entry
111308090         CDS       T05242                                 
Name
(RefSeq) tetratricopeptide repeat protein SKI3 isoform X1
  KO
K12600  superkiller protein 3
Organism
dzi  Durio zibethinus (durian)
Pathway
dzi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111308090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dzi03019]
    111308090
Messenger RNA biogenesis [BR:dzi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     111308090
SSDB
Motif
Pfam: TPR_11 TPR_2 TPR_1 TPR_14 TPR_17 TPR_16 TPR_8 TPR_9 TPR_19 TPR_12 TPR_7 DUF6584 TPR_15 BTAD
Other DBs
NCBI-GeneID: 111308090
NCBI-ProteinID: XP_022762474
UniProt: A0A6P6AC59
Position
Unknown
AA seq 1184 aa
MKTTQEEEERRRLEELVESNPDDPSLHFQLGLCLWECETEKERAAEHWVLSAKQNPKNAA
AFKYLGHYYATVSVDVQRAIKCYQRALSLHPDDSDAGEALCDLLDRQGKESLELAICKDA
SHNSPRAFWAFRRLGFLQVHHKKWSEAVQSLQHAIRGYPTSPDLWEALGLAYHRLGMFTA
AIKSYGRAIELEDTRVFALVECGNIFLMLGSFRKGIEQFQQALKITPQNISALCGLASGL
LGLSKECINSGAFRWGASLLEGACKVAEASIQSAGNSSGTWKLHGDIQGCFPPGQLAYAQ
GYPWMEESQSLEYKAETFEKSIYSWKNTCCSAAISAKNSYQRALHLAPWQANIYIDIAIS
SNLISSFYKDHTHDKCTWQLSEKMTLGALLIESDNFEFWVALGCLSECNALKQHAFIRGL
QLDVSIANAWAYLGKLYREENEKKLARQAFDCARGIDPSLALPWAGMSADTHSGESTPDD
AFESCLRAVKILPLAEFQIGLAKLALLSGNLLSSQVFGAIQQAVQRAPHYHESHNLNGLV
CEARFHFQAAIASYRLARYTINISAGTLLKAHLKVISINLARSLSKAGNAIGAVQECEDL
EKEGMLDAEGLQIYAFSLWKLGEHEAALSMTRTLAASIPTMDRTSAAVSVSFICRLLYYI
SGQDLAIVSIMKMPKELFQSSKISIIVSAINALDQNYRLESIVSSSRYFLASHEEITGMH
YLIALSKLIKHGTEHHLEFQSGVSHLRKVLHMYPNSNLIRNLLGYLLMASEIWGNTHVAS
TYSIIDSSDSRNKEGLKLAWEIFSAGAVACHSMGNSEPRFSFPTCGCQCQSGFGAMKELQ
KWLRQEPWNRNGRYLLVLNLLQKAREERFPINLCVMLERLIIVALSDEFYSGKEASCQYQ
KFQLYLCASEILLQRGNIISCINHAKDASALLLPNSYQFFGHLLLCRAYAAEGNFKNCKE
EYERCLGLKTDFLVGWICLKVMESQYELQTVSNVVELAFKESSRGRNNSWNMWMAVYTLM
MGMICIWNQDFLSAEDFLEQSCSLASAESCIFLCHGVTSLEIARRYRYSQFLSSAIRSLS
RAYVTSSVPIPFISALLAQAEGSLGYRKKWERNLRLEWFSWPPEMRPAELFFQMHLLARQ
IESESDSSSRVEYCQSPQQWVLRAIHTNPSSLRYWKVLRSLCNN
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgaaaacaacgcaggaggaagaagaaagaaggcggctggaagagttggtggaaagcaat
cccgatgacccctcccttcattttcaacttggactatgcttgtgggaatgtgagacagag
aaagagagagcggcggagcattgggtgctttccgcaaaacaaaaccctaaaaacgcagca
gccttcaaatacttgggccattactacgccactgtttcggttgatgtccagagagccatc
aaatgttatcagagagctctatcccttcatcccgatgattccgatgctggggaagctttg
tgtgatttgttggaccgacaaggcaaggagtccttggagctcgcaatttgcaaagatgct
tctcacaactcccccagggctttctgggcattccgccgattgggttttctccaggtgcat
cataagaaatggtctgaagctgtacaaagtcttcaacatgccattcgcggctatcctacc
tctcctgatttgtgggaagctcttggtcttgcctaccatcgacttggcatgtttactgcc
gcaattaagtcctatgggcgtgcaattgaattggaagatacaagagtctttgcgctggtt
gaatgtggaaacatctttttgatgcttggttcctttagaaagggaattgagcaatttcag
caagcactgaagatcacaccacaaaatatatctgcactctgtggacttgcatctgggctt
cttggtctgtcaaaagaatgtataaattcaggagcatttagatggggagcttcattgtta
gagggtgcatgcaaagtagcagaagcaagcatccaatcagctggtaattcatcaggtact
tggaagttgcatggtgatattcaggggtgtttccctcctggccagcttgcatatgctcaa
ggttatccatggatggaggagagccagagtttagaatataaggctgaaacttttgagaag
tccatatattcgtggaagaatacttgttgttcagctgctatatctgccaaaaactcttat
caacgagctttgcacttagccccatggcaggctaacatctatattgacattgccattagt
tccaatcttatctcttctttttacaaggatcatacacatgataaatgtacctggcagcta
tcagagaagatgacattgggggctttgctgatagagagtgacaactttgagttctgggta
gctttgggctgtttgtctgagtgtaatgcattgaaacagcatgcttttatcaggggactg
cagttggatgtgtctatagctaatgcatgggcgtatcttggaaagctttatagagaagag
aatgagaagaaattggctaggcaagcttttgactgtgctagaggtatagatccatcacta
gcattaccatgggctggcatgtcagctgatactcattctggggagtcaacaccagatgat
gcttttgagagctgcctacgtgctgtgaagatattgcctcttgcagagttccaaattggt
ctagctaagcttgctttgctttcagggaaccttttatcttcacaggtatttggagctatc
cagcaggcagtgcaacgtgcaccccattatcatgaatcccataatttaaatgggctagta
tgtgaggctcgttttcattttcaagctgccattgcttcttataggctagctcgctatacc
atcaacatttctgcaggcactttgctcaaagctcatttgaaagtcatatcaattaatttg
gccagatcacttagtaaggcagggaatgccataggtgctgtgcaagaatgtgaagacttg
gagaaagaaggtatgcttgatgcagaaggtttgcaaatatatgctttctccttatggaaa
ctgggagagcatgaggcagccctctccatgactagaaccctagctgccagcattcctacc
atggataggacatctgcagctgtgtctgttagtttcatttgtagattgctgtactacatt
tctggacaggatttagcaattgttagcataatgaaaatgccaaaggaactatttcagagt
tcaaaaataagcattattgtctctgccattaatgctctggatcagaattacaggctggaa
tcgattgtttcaagcagtcgttactttcttgcatcacatgaggagattactggcatgcac
tatctaatcgcacttagtaaactaattaaacatgggacagagcaccaccttgaatttcag
agtggagtcagtcatcttagaaaagttcttcacatgtaccctaacagtaatttaataagg
aacctacttggttatcttttgatggccagtgaaatatggggaaatactcatgtggcaagt
acatactctatcattgattcttctgactctaggaacaaagaaggcttaaaattggcatgg
gagatcttcagtgctggggcagttgcttgccattcgatgggcaatagtgaaccgcggttt
tctttcccaacatgtggctgtcaatgccaaagtggttttggagctatgaaagagctacag
aagtggttacgccaagagccatggaaccgtaatggccgatacttgcttgtgcttaatctt
ttacagaaagcacgtgaagagagatttcccataaacctttgtgtcatgcttgaacgtctc
attattgtggctctttctgacgagttctattctggaaaagaagcctcttgtcaatatcag
aagtttcagctttatttatgtgcttctgaaattcttttgcaaagggggaatataattagc
tgtatcaaccatgcaaaagatgcttcagcacttttgcttcctaatagctaccagtttttt
ggacacttactattatgtcgtgcctatgctgcagaaggcaattttaaaaattgcaaagaa
gagtatgaaagatgcttggggcttaagacagattttcttgttggttggatatgcctaaaa
gtaatggaatctcaatatgaactgcaaactgtttcaaatgttgttgagttagccttcaag
gaaagctcaagagggaggaataattcatggaatatgtggatggctgtatatactttaatg
atgggtatgatatgtatatggaatcaggattttctttctgcagaggattttctggagcaa
agttgttcgttagccagtgctgagagctgcattttcctttgccatggtgtcacttctctg
gagattgcacggaggtatcgttattcacaatttttgtctagtgccataaggagtctcagt
agagcttatgtgacttcttcggtcccaataccttttatctcagcattgttggcccaagca
gaaggaagccttggttataggaaaaaatgggagagaaaccttcgtcttgaatggttttct
tggccaccagaaatgagacctgcagagctcttttttcaaatgcatttgcttgcaagacag
attgaatctgagtctgacagttcatccagggtagagtactgtcaaagtccccagcaatgg
gttcttcgagcaatacacacaaacccttctagcttgagatattggaaagttctgcgaagc
ttatgtaacaactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (14)   
   Pfam (14)   
All databases (39)   

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