KEGG   Endosymbiont of Acanthamoeba sp. UWC8: I862_02560
Entry
I862_02560        CDS       T03255                                 
Name
(GenBank) ribonuclease Rne/Rng family protein
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
eaa  Endosymbiont of Acanthamoeba sp. UWC8
Pathway
eaa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    I862_02560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eaa03019]
    I862_02560
   03009 Ribosome biogenesis [BR:eaa03009]
    I862_02560
Enzymes [BR:eaa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     I862_02560
Messenger RNA biogenesis [BR:eaa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     I862_02560
Ribosome biogenesis [BR:eaa03009]
 Prokaryotic type
  rRNA processing factors
   I862_02560
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1 AIB
Other DBs
NCBI-ProteinID: AIF81075
UniProt: A0A075MJ63
Position
complement(526273..528369)
AA seq 698 aa
MSKLMVIDGAHPEETRAVVINKGIIEEFDYQNTYKKSTKGNIYLAKVIRVEPSLQAAFVD
YGGERHAFLPFPEIHPSYYQLPKVDKEALLSSMVDAEDKELLLDENRKIEQFDIEEEGEE
EVKETKNTKDTIAQEPAEGDAASEGEEAEAELISSEAEGEESSVGEFRPDFYKNYKIQEV
IKKDQVLLIQIVKEERGNKGASVTTYISLAGRYCVLMPNSIRAGGVSRKIMDNQERQRLK
SVADELNEKASTAASVIVRTAGAHKTKTEVKRDFNYLIRLWNNIREHTLASKAPAFIHEE
GDVIKKSIRDLYNSDMEQILVAGDEAYENARKFMELILPKRVDSVKKYKGKSPIFVKYNI
ENQLNTFYDPVAPLKSGGYLVINHTEALVAIDVNSGRATSERNVENTAVKTNMEAAREIA
RQIKLRDLSGLIVIDFIDMEDSRNRRTVEREFKEALSNDRARIQVNRISMFGLLEMTRQR
LRKSFFESSTHVCAHCDGRGRIRPVEATAIAVLRALDNDLAEGSCDEIKVSGSEKLMFYI
LNNKREEISKLEKSHKVRITFYTDEEAGADGFFIEKSKKTKEEAVTQSALSAIDVEPYAV
EEPAEEEDSSAKRKWKTNAKKPTFHEQEREVEHTHKRVDKRKGKGVNNNRFKNKENRAPV
KEIIPYDYEEDNAFEENMEKKRKQNQSFLKEIWKKIVE
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgtcaaaactgatggtgatagatggcgcacatcctgaagaaacgcgcgcagtagtgatt
aataaaggaataattgaagaatttgattatcaaaacacttataagaaatctacaaaggga
aatatatatttagcaaaagtaattagagttgagccttcattacaggctgcatttgttgat
tacggaggggaaagacatgcattcttaccttttcctgaaatccacccttcttattaccaa
ttgcctaaggtggataaagaagctttactttcatctatggttgatgcggaagataaagag
ttgttattagatgaaaataggaaaatcgagcagtttgatatcgaagaagaaggagaagaa
gaagttaaagagactaaaaatactaaggatacaatcgctcaagaacctgctgaaggagat
gccgcttccgaaggagaggaagctgaagccgaattaatttcttcggaagctgaaggtgaa
gaaagttcggtcggagaattccgtccagatttttataaaaactataaaattcaggaagta
ataaagaaagatcaggtactgcttatccaaatcgtaaaagaagaaaggggaaataaagga
gcatcggttacaacttatatctcacttgcaggcagatattgcgttttaatgccgaattca
ataagggcaggcggtgtatccagaaaaattatggataaccaggaaagacaaaggctaaaa
agtgttgcggatgaactaaacgagaaggcaagtacggccgcaagcgttatcgtgcgcacc
gcaggtgctcataaaaccaaaaccgaagtaaaaagagattttaattatttgatcaggctt
tggaataatattagggaacacacgcttgcttcaaaagccccggctttcatccatgaagaa
ggagatgtaattaaaaaatcaattcgtgacctttataatagcgacatggagcaaattttg
gttgcaggcgacgaagcttatgaaaatgccagaaaatttatggaacttattctgcctaaa
cgcgtagacagcgtcaaaaaatataaaggcaagtcacctatatttgtaaaatataacatt
gaaaatcaattaaatactttttacgatcctgtagcacctcttaaatcaggcgggtatttg
gttatcaaccatacggaagcacttgttgcaatcgatgttaactccggaagagcaacttct
gaaagaaatgtagaaaacaccgcagtaaaaaccaatatggaagctgcacgggaaatcgcc
agacaaattaagcttagagatttatccggtttgattgtaatcgactttatcgatatggag
gattccagaaatcgcagaacagttgaaagagagtttaaagaggcgcttagtaacgaccgc
gcaaggatccaagtaaatagaatcagtatgtttggtttacttgaaatgacacgtcagagg
ctgcgtaaaagcttctttgaatcaagcactcacgtttgcgcgcactgcgacggtagggga
agaatcagaccagtggaagcaaccgctattgccgttttaagagcattggataatgatctc
gctgaaggaagctgtgatgagattaaagtatcaggcagtgaaaaactaatgttttatatt
ttaaataataagcgtgaggaaatttcaaaacttgaaaaatcacataaagtcagaataact
ttttatactgatgaagaagcgggtgcagacgggttctttattgaaaaaagtaagaagact
aaggaagaagccgtgacacaatcagcattatcggcaattgatgtcgagccttatgcggtt
gaagaaccggctgaagaagaagattcttccgctaagagaaagtggaaaactaatgctaag
aaacctaccttccatgaacaggagagagaagtggagcatacccacaaaagagtagacaaa
agaaaaggaaaaggtgttaataataatagatttaaaaacaaagaaaaccgagctccggtt
aaagaaataattccttatgattatgaggaagataatgcttttgaagaaaacatggaaaaa
aagagaaagcaaaaccaatctttcttaaaagaaatctggaaaaaaatagtagaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (48)   

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