KEGG   Ensifer adhaerens Casida A: FA04_05455
Entry
FA04_05455        CDS       T04507                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
eah  Ensifer adhaerens Casida A
Pathway
eah03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:eah00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FA04_05455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eah03021]
    FA04_05455
   03400 DNA repair and recombination proteins [BR:eah03400]
    FA04_05455
Enzymes [BR:eah01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FA04_05455
Transcription machinery [BR:eah03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FA04_05455
DNA repair and recombination proteins [BR:eah03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FA04_05455
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 DOCK-C2
Other DBs
NCBI-ProteinID: ANK72117
UniProt: A0A9Q8Y8D8
Position
1148577..1152716
AA seq 1379 aa
MAQTLSFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPKGGRPDEGLQAVFK
SVFPIKDFSGASMLEFVSYEFEPPKFDVEECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQNVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDAKDIVHARIDRRRKIPVTSLLMALGMDGEEILDTFYTKSLYQR
DGEGWRVPFQPDALKGQKAITEMVDADTGEVVVEAGKKLTPRLLRQLQEKGLKALKATND
DLYGNYLAEDVVNYSTGEIYLEAGDEIDEKTLPVILSAGFDEIPVLDIDHINVGAYIRNT
LTVDKNENRQDALFDIYRVMRPGEPPTMDSAEAMFNTLFFDAERYDLSAVGRVKMNMRLD
LEVADTVRILRKEDILAVVKMLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRLGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRKIVDGKVTNDVVYLSAMEEAKYHVAQANSVLENDGSFAEEFVVCRHAGEVMLAPRDNI
NLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMEPVVAR
DSGAAIAARRGGVVDQVDATRIVIRATEDLDPSKSGVDIYRLQKFQRSNQNTCVNQRPLV
TVGDILNKGDIIADGPSTDLGDLALGRNALVAFMPWNGYNYEDSILLSERIVRDDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALRNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYARLVDMLRGHTAVAGPKGFKKGTELSNLVVSEYPRSQWW
MFAVEDEKAQGEIEALRAQYDESKSRLEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRIVPIEDMPFLEDGTHVDVVLNPLGVPSRMNVGQILETHLG
WACAGMGQKIGAMLDAYKAGADIQPLRDTIDSVIGSGPKGEPIKQYDDESIVRLAEQTRR
GVSIATPVFDGAVEADVNEMLEQAGLKVTGQSTLYDGRTGDQFDRQVTVGYIYMLKLNHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLSVELENSKVDEAGAAQLPDAAE
NT seq 4140 nt   +upstreamnt  +downstreamnt
atggctcagaccctttcgtttaacggtcgcaggcgcgtacgcaagttttttggtaaaatt
ccagaagtcgcagaaatgccgaacctcatcgaggttcaaaaggcatcctacgaccagttt
ctgatggttgaagagcccaagggcggtcgccctgatgaagggctccaagctgttttcaag
tccgttttcccgatcaaggacttctcgggcgcatcgatgcttgaattcgtttcgtacgaa
ttcgagccgccgaagttcgacgtcgaagaatgccgtcagcgcgatctgacctacgcagcg
ccgctcaaggtgacgctgcgcctcatcgtgttcgatatcgacgaggataccggcgcgaag
tcgatcaaggacatcaaggaacagaacgtctacatgggcgacatgccgctcatgaccgac
aacggtaccttcatcgtcaacggcaccgagcgcgtcatcgtttcgcagatgcaccgttcg
ccgggcgtgttcttcgaccacgacaagggcaagagccactcgtcgggcaagctgctgttt
gcggcccgtgtcattccttaccgcggttcctggctcgacatcgagttcgatgccaaggat
atcgttcatgcccgtatcgaccgtcgccgcaagattccggtgacgtcgctgctgatggcg
ctcggaatggacggcgaggaaatcctcgacaccttctacacgaagtcgctctaccagcgc
gacggcgaaggctggcgcgtgccgttccagccggacgcccttaagggccagaaggccatc
accgagatggtcgacgccgacaccggcgaagtcgttgtcgaagctggcaagaagctgacc
ccgcgtctgctgcgccagctgcaggaaaagggcctgaaggcgctcaaggcgaccaatgat
gacctctacggcaactaccttgccgaagacgtcgtcaactacagcaccggcgagatctat
ctcgaagccggcgacgaaatcgacgagaagacccttccggtcatcctctcggctggtttc
gacgagatcccggttctcgacatcgaccacatcaatgtaggcgcctacatccgcaacacg
ctgaccgtagacaagaacgagaaccgtcaggacgccctgttcgacatctaccgcgtcatg
cgtccgggtgaaccgccgaccatggattccgcggaagccatgttcaacacgctgttcttc
gatgccgagcgctacgacctttcggccgtcggtcgcgtcaagatgaacatgcgtctcgac
ctcgaagttgccgacaccgtgcgcatcctgcgcaaggaagacatcctggctgtcgtcaag
atgctcgtcgagctgcgtgacggcaagggcgagatcgacgacatcgacaacctcggcaac
cgccgtgttcgttcggtcggcgagctcatggagaaccagtaccgtctcggcctgctccgc
atggagcgcgcgatcaaggaacgcatgtcctcgatcgaaatcgacacggtcatgccgcag
gacctgatcaacgcgaagccggctgcggccgccgttcgcgagttcttcggctcctcgcag
ctgtcgcagttcatggaccaggtgaacccgctttcggaaatcacccacaagcgccgtctt
tcggctcttggcccgggtggtctgacccgcgagcgcgccggcttcgaagtccgcgacgtt
cacccgacccactacggccgtatttgcccgatcgaaacgccggaaggcccgaacatcggt
ctgatcaactcgcttgcaacctttgcccgcgtcaacaagtacggcttcatcgaaagcccg
taccgcaagatcgttgacggcaaggtgacgaacgacgtcgtctatctctccgcaatggaa
gaggcgaagtaccacgttgcccaggcaaactcggttctcgagaacgatggctcgttcgct
gaagagttcgttgtttgccgtcacgccggcgaagttatgctggcgccgcgcgacaacatc
aacctgatggacgtttcgccgaagcagctcgtttcggtcgcagcggcgctcatcccgttc
ctcgagaacgacgacgccaaccgcgcactgatgggctcgaacatgcagcgtcaggccgtg
ccgctgctgcgcgccgaagcaccgttcgtcggtaccggcatggagccggtcgttgcccgt
gactccggcgctgctattgcagcccgtcgtggcggtgtcgtcgaccaggttgacgcgacg
cgtatcgttatccgcgccaccgaagacctcgatccgtcgaagtcgggcgtcgatatctac
cgtctgcagaagttccagcgctcgaaccagaacacctgcgtcaaccagcgcccgctggtc
accgtcggtgacatcctgaacaagggtgacatcatcgctgacggtccgtcgaccgacctc
ggtgacctggctctcggccgcaacgcgctcgtcgcgttcatgccgtggaacggctacaac
tacgaagactcgatcctgctctccgagcggatcgtgcgcgacgacgtgttcacctccatc
cacatcgaagaattcgaagtgatggcgcgtgacaccaagctgggtccggaagaaatcacc
cgcgacattccgaacgtttcggaagaagcgctgcgcaaccttgacgaagccggtatcgtt
tatatcggtgcagaggttcagccgggtgacatcctcgtcggcaagatcacgccgaagggc
gaaagcccgatgacgccggaagaaaagcttctgcgcgccatcttcggtgaaaaggcctcc
gacgttcgcgacacctcgatgcgcatgcccccgggcaccttcggtaccgtcgtcgaagtt
cgcgtcttcaaccgccacggcgttgagaaggacgagcgcgcgatggcgatcgagcgcgag
gaaatcgaacgcctcgccaaggaccgcgacgacgaacaggcgatcctggaccgcaacgtc
tacgcccgtctcgtcgacatgctgcgtggccacacggccgttgccggcccgaagggcttc
aagaagggcaccgagctttcgaacctcgtcgtcagcgaatacccccgctcgcagtggtgg
atgttcgccgtcgaagacgaaaaggctcagggcgagatcgaagctctgcgcgcccagtac
gacgaatccaagtcgcgcctcgaacagcgcttcatggacaaggtcgagaaggtccagcgc
ggcgacgaaatgcctccgggcgtcatgaagatggtcaaggtcttcgtcgctgtgaagcgc
aagatccagccgggtgacaagatggccggccgtcacggcaacaagggcgttgtgtcgcgt
atcgtaccgatcgaagacatgccgttcctggaagacggcacgcatgtcgacgtcgttctg
aacccgctcggcgtgccttcgcgcatgaacgtcggccagatcctcgaaacccaccttggc
tgggcttgcgccggcatgggtcagaagatcggcgcgatgctcgacgcctacaaggcaggt
gccgatatccagccgctgcgcgacaccatcgacagcgtcatcgggtcgggcccgaagggt
gagccgatcaagcagtacgacgacgagtcgatcgtgcgcctggccgagcagacccgtcgc
ggcgtttcgatcgcaacgccggtcttcgacggtgctgtcgaagccgacgtcaacgagatg
ctggagcaggcaggtctgaaggtgaccggtcagtcgacgctctatgacggccgtaccggc
gatcagttcgaccgccaggtgaccgtgggctacatctacatgttgaagctcaaccacctg
gtcgacgacaagatccacgcccgttcgatcggtccgtactcgctcgtcacccagcagccg
ctcggtggtaaggcgcagttcggcggtcagcgcttcggggaaatggaggtctgggcgctc
gaagcgtacggcgccgcctacaccctgcaggaaatgctgacggtcaagtcggacgacgtt
gccggtcgtacgaaggtctacgaagcgatcgtccgtggcgacgataccttcgaagcgggc
attccggagagcttcaacgttctcgtcaaggaaatgcgctcgctgggcctttcggtcgag
ctcgaaaactcgaaggtcgacgaggctggcgcggcgcagttgcccgacgcagccgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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