KEGG   Equus asinus (ass): 106832881
Entry
106832881         CDS       T04645                                 
Symbol
VPS4B
Name
(RefSeq) vacuolar protein sorting-associated protein 4B
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
eai  Equus asinus (ass)
Pathway
eai03250  Viral life cycle - HIV-1
eai04144  Endocytosis
eai04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:eai00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106832881 (VPS4B)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106832881 (VPS4B)
  09143 Cell growth and death
   04217 Necroptosis
    106832881 (VPS4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:eai04131]
    106832881 (VPS4B)
   03400 DNA repair and recombination proteins [BR:eai03400]
    106832881 (VPS4B)
Membrane trafficking [BR:eai04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    106832881 (VPS4B)
DNA repair and recombination proteins [BR:eai03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    106832881 (VPS4B)
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_16 TIP49 AAA_14 AAA_5 RuvB_N AAA_22 IstB_IS21 AAA_25 AAA_18 DUF815 AAA_2 nSTAND3 AAA_33 AAA_17 RNA_helicase AAA_24 PhoH AAA_7 Mg_chelatase ResIII NACHT Parvo_NS1 AAA_28 bpMoxR DUF5906 Viral_helicase1 MCM
Other DBs
NCBI-GeneID: 106832881
NCBI-ProteinID: XP_014699285
Position
7:complement(113810274..113836902)
AA seq 444 aa
MASTSTNLQKAIDLASKAAQEDKAENYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRA
KCTEYLDRAEKLKEYLKKKEKKPQKPVKEGQPRPADEKGNDSDGEGESDDPEKKKLQNQL
QGAIVIERPNVKWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGK
SYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLC
GSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPL
PEAHARAAMFKLHLGTTQNSLTEADFRELGMKTEGYSGADISIIVRDALMQPVRKVQSAT
HFKKVRGPSRADPNNIVDDLLMPCSPGDPGAIEMTWMDVPGDKLLEPVVCMSDMLRSLSS
TKPTVNEHDLLKLKKFTEDFGQEG
NT seq 1335 nt   +upstreamnt  +downstreamnt
atggcatccacctcgaccaacctccagaaggcaatagatcttgctagcaaagcagcccag
gaagacaaagctgagaactatgaggaagcccttcagctctaccaacatgctgtgcagtat
tttctccacgtagttaaatatgaagcacagggtgataaagccaagcagagtatcagggca
aagtgtacagaatatcttgatagagcagaaaaactaaaggagtacctgaaaaagaaagag
aaaaaaccacagaagccagtgaaagagggacagccgcgtccagctgatgagaaggggaat
gacagtgatggggaaggagaatctgatgatcctgaaaaaaagaaactacagaatcaactt
caaggtgccattgttatagagcgaccaaatgtgaaatggaacgatgttgctggtcttgaa
ggagccaaagaagctcttaaagaggctgtgatattgcctattaaatttcctcatcttttt
acaggcaagaggacgccttggaggggaatcctgttatttgggccacctggaacaggaaag
tcctatttagccaaagctgtagcaacggaagcaaacaactcaacctttttttcaatatct
tcctctgaccttgtttctaagtggctaggcgaaagcgaaaagctagttaagaatttattc
caacttgccagagagaataaaccttccattatcttcattgatgaaattgattctctgtgt
ggttcaagaagtgaaaatgaaagtgaagctgcacgtagaattaagacagagttcctagtt
caaatgcaaggcgttggtgtggacaatgatggaattttggttctgggagctacaaatata
ccctgggttctggattctgccattagaagaagatttgaaaaacgaatttatattcctttg
cctgaggcccatgctcgagcagcaatgtttaaactgcacttggggaccactcagaacagt
ctgacagaagcagacttccgagaattggggatgaaaactgagggttattcaggggcagac
ataagtatcattgtgcgcgatgcacttatgcagcctgttcgaaaagtgcagtcagctact
cattttaaaaaggttcgaggaccttcacgagctgatcctaacaacatagtagatgatctg
ctaatgccctgctctccaggcgaccctggtgccattgaaatgacgtggatggatgtccct
ggggataaacttttggagccagttgtttgcatgtcggatatgttacggtcactgtctagc
acgaagcccacagtcaatgaacatgacttgttgaaattaaagaagtttacagaagatttt
ggccaagaaggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (44)   

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