KEGG   Equus asinus (ass): 106839957
Entry
106839957         CDS       T04645                                 
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
eai  Equus asinus (ass)
Pathway
eai03013  Nucleocytoplasmic transport
eai03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:eai00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106839957 (SRRM1)
   03015 mRNA surveillance pathway
    106839957 (SRRM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eai03019]
    106839957 (SRRM1)
   03041 Spliceosome [BR:eai03041]
    106839957 (SRRM1)
Messenger RNA biogenesis [BR:eai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106839957 (SRRM1)
Spliceosome [BR:eai03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    106839957 (SRRM1)
SSDB
Motif
Pfam: PWI FliX
Other DBs
NCBI-GeneID: 106839957
NCBI-ProteinID: XP_014710524
UniProt: A0A8C4LC31
Position
5:19872189..19902450
AA seq 915 aa
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKETSREKRERSRSPRRRKSRSP
SPRRRPSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKARHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRMQMGKRWQSPMTKSGRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPPPRRRTPSPPP
RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSP
PASKRRSPSLSSKHRKGASPSRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASSS
PQRRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSVRRVSSSRSVSGSPEPATKKPPAP
PSPVQSQSPSTNWSPAVPIKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKK
HKKHKKEKAAAAAAAVTPVAAAAPTTTSAQEEPEAEPEPRKETESEAEDNLDDLEKHLRE
KALRSMRKAQVSPQS
NT seq 2748 nt   +upstreamnt  +downstreamnt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatctggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctgctgttaagtgcacaggaaaacatcgctggaatccct
tctgctttcctagaactgaagaaagaagaaataaaacagagacagattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaagataagagggataaggaagaaaaagaa
accagcagagaaaaaagggagaggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacggccttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagaaaagaaggagaaaact
ccagagctcccagaaccgtcagtgaaagtaaaagaaccttcagtacaagaggccacgtct
actagtgacatcctgaaagttcccaagcctgaacctgtaccagagcctaaggaaccttct
ccggagaaaaattccaaaaaagaaaaggaaaaggaaaagacccgaccaagatcacggtct
cgttccaaatcaagatcccggacacgttctcgctctccttctcatactcgccctaggcgg
cgccacaggtcccgatcacgatcatactcacctagaaggcggccaagcccaagaaggcgg
ccatctcctcgaagaagaactccaccaagacgaatgcctcctccaccaaggcataggagg
agcagatcgccagtgagacgaaggcggcgctcgtcagcatccttgtctgggagcagctcg
tcatcctcttcgtctcgttcccggtcaccgccaaagaagcctcctaagaggacatccagc
ccccctcgaaaaactcgcaggttatctccttcagcgagccctccgaggcgaaggcacagg
ccgtcacctccagcgagtccaccgccaaaagctcgtcactccccaacaccccagcagtca
aaccgtacaaggaaaagtcgagtttctgtctctccagggagaacttcaggtaaagtgacg
aaacataaaggtactgagaaaagagagtccccttcaccagcacccaagcctagaaaagta
gaattgtctgaatcggaagaagataaagggggcaaaatggctgcagccgactcggtgcag
cagagacgccagtacagacgccagaaccagcagtcgtcgtcagattctggctcctcctct
tcttcggaagatgagcgacccaagaggtcccatgtgaagaacggggaggtgggcaggcgg
cggagacattccccttcccggagtgcctctccctcacctcgaaagcgccagaaagagact
tcccctcggatgcagatgggaaagcgatggcaatcgccaatgactaaaagcggcagacgg
aggaggagcccctccccaccacccgccagaaggcgacgctctccttctcctgcccctcct
cctcgacggcgcaggtctcccacgccaccaccgcgccgaaggactccttctcctccgcca
cgtcggcgctccccttccccgagaagatactctcctcccatacagaggagatactctcct
tctccacctccaaagagaaggacggcctcccctcctccccctcctaagcgaagggcgtca
ccatccccgccaccaaagcgccgggtctcccactccccgccgcccaaacagagaagcccc
ccggcctccaagagacgctcgccttcgttgtcatcaaagcataggaagggggcctccccg
agccgatccacccgggaggcccggtcaccacagccaaataaacgacattcgccctcacca
cggcctcgagctcctcagacctcaagtcctccacctgttcgaagaggagcgtcatcatca
ccccaaagaaggcagtccccatctccaagtacgaggcccattaggagagtttccaggact
ccggaacccaaaaagacaaaaaaggctgcctctccaagccctcagtctgtaaggagggtc
tcatcctccagatctgtctcaggatctcctgagccagccactaaaaaaccccccgcacct
ccatcccccgtccagtctcagtcgccctctaccaactggtcaccagcggtacccatcaaa
aaggctaaaagcccaacgccaagcccgtcaccggcaaggaattcggaccaagaaggaggt
ggaaagaagaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaagaag
cacaaaaaacacaagaaggaaaaggctgcggctgcggctgctgctgtaacgcccgtggcc
gccgctgcccccacaaccacgtcagcacaggaggaaccggaggcggagcccgagccccgg
aaggagactgagagtgaagccgaagataaccttgatgacttagaaaagcacctgcgtgaa
aaggccctgagatcaatgcggaaggctcaagtgtccccacagtcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (15)   
   UniProt (1)   
   RefSeq(pep) (14)   
DNA sequence (14)   
   RefSeq(nuc) (14)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system