KEGG   Equus asinus (ass): 106841510
Entry
106841510         CDS       T04645                                 
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
  KO
K14328  regulator of nonsense transcripts 3
Organism
eai  Equus asinus (ass)
Pathway
eai03013  Nucleocytoplasmic transport
eai03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:eai00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106841510 (UPF3B)
   03015 mRNA surveillance pathway
    106841510 (UPF3B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eai03019]
    106841510 (UPF3B)
Messenger RNA biogenesis [BR:eai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     106841510 (UPF3B)
   mRNA cycle factors
    P-body specific factors
     106841510 (UPF3B)
SSDB
Motif
Pfam: Smg4_UPF3 RRM_1
Other DBs
NCBI-GeneID: 106841510
NCBI-ProteinID: XP_014713044
UniProt: A0A8C4LXZ5
Position
X:92438676..92454217
AA seq 482 aa
MKEEKEHRPKEKRVTLLTPPGATGSGGGASGDSSKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
AKKLDKENLNDERASGQSCTLPKRSDGELKEEKPRRPEDESGRDYRERDRDYERDQERIL
RERERLKRQEEERRRQKERYEKEKAFKRKEEEVKKEKEALRDKGKKTESTESVGSSEKTE
KKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAIEKKQESGISHRKEG
EE
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaaggaggagaaggagcacaggccgaaggagaagcgagtaaccctcttgactcccccg
ggggccacaggcagcggcggtggggcttcgggggacagcagcaaaggggaagataaacag
gatcgaaacaaggagaagaaagaggcgctgagcaaggtggtaattcggagattacctcct
actttgaccaaggagcagcttcaggaacatcttcagcctatgcccgagcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagatactaaagttgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagaaagaaggagg
cgagaaatagaaagaaaaagacaaagagaagaagagaggaggaaatggaaagaagaagag
aaacgaaaaaggaaagatatagaaaagctaaagaagatagacagagttccagaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctgctcaagaagccagaaaaaggagatgaaaaagaattggacaaaagagaaaaa
gccaagaaactggacaaagagaatctgaacgatgaaagagccagtgggcaaagttgcaca
ttgcccaagcgttctgatggtgaacttaaagaggaaaagcctaggagacctgaagatgag
agtggcagggactacagggagagggaccgggattacgaacgtgatcaagagcgcatactt
cgggagagagagagactcaagcggcaagaagaagagcgccgcaggcagaaggagcgctac
gagaaggagaaggcttttaaaaggaaggaggaggaagtgaaaaaagagaaagaagcactt
cgggataaagggaagaagactgaaagtacagaatcagtaggcagctcagaaaaaactgaa
aagaaagaggaagtggttaagagagatcgcataagaaacaaggatcgcccagcaatgcag
ctttaccaaccaggagctcgaagccgaaatcgactctgtccccctgatgacagcaccaag
tctggagattcagcaatagaaaaaaagcaggaaagtggtattagccatagaaaagaagga
gaggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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