KEGG   Sinorhizobium alkalisoli: EKH55_3152
Entry
EKH55_3152        CDS       T06241                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
eak  Sinorhizobium alkalisoli
Brite
KEGG Orthology (KO) [BR:eak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:eak03016]
    EKH55_3152
Enzymes [BR:eak01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     EKH55_3152
Transfer RNA biogenesis [BR:eak03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    EKH55_3152
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: QFI68026
UniProt: A0A1E3VBC7
Position
1:complement(3196466..3197053)
AA seq 195 aa
MPRLFTALEIPRNAALSLSLLRGGLPGARWIDVENYHITLRFIGDVDWRTANEVVDSLDR
IERPEFQLQLTGTGAFGSKKPHSVWAGVSNTPEMFALQAEIERICQRLGLAADPRKFTPH
VSLARLRSSRVEDVVEYLSGRGNFVTAPFTVSRFVLMSSRDSVGGGPYVTEEVFPLHEAH
SSFASSEEHPASSIW
NT seq 588 nt   +upstreamnt  +downstreamnt
atgccgagactgttcaccgccctcgaaattccccgcaatgcagcattgagcctttctctg
ctgcgcggaggccttcccggagctcgttggatcgatgtggagaattaccacatcacgctg
cgcttcatcggcgacgtcgattggcggactgccaacgaggttgtcgacagcctcgatcgg
atcgaacggccggaattccagctgcaactgaccggcaccggcgccttcggctcgaagaaa
ccgcattcggtctgggccggcgtcagcaacactcccgaaatgttcgcgctgcaggcggaa
atcgaacgcatctgccagcggcttggccttgcagcggacccgcgcaagttcaccccacat
gtctcgctcgcgcgcctgcggtcctcacgcgtcgaggacgtcgtcgaatatctctccgga
cggggcaacttcgtcaccgcgcccttcacggtctcgcgcttcgttctcatgtcctcgcgc
gattcggtcggtggcgggccttacgtgacggaagaggtgtttccgcttcatgaagcgcac
tccagcttcgcaagtagcgaagagcacccggcctccagcatctggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system